| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4423 |
|---|
| Symbol | |
|---|
| ID | 5107118 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | + |
|---|
| Start bp | 4844201 |
|---|
| End bp | 4844473 |
|---|
| Gene Length | 273 bp |
|---|
| Protein Length | 90 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640505689 |
|---|
| Product | export protein FliQ |
|---|
| Protein accession | YP_001189902 |
|---|
| Protein GI | 146309437 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1987] Flagellar biosynthesis pathway, component FliQ |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 0.844817 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCACGC CCGAACACGC CGCCCAGCTG GTGGCTCATG CCGTCTACAT CACCGGTCTG
ATCGTCTGCG TGCTGGTGGT GCCGAGCCTG CTCGGCGGCC TGCTGGTGAG CATTTTCCAG
GCGGCTACGC AGATCAACGA GCAGATGCTC AGCTTTCTCC CACGCCTGCT GATCACCCTG
GCGATGTTGG TGTTCGCCGG CCACTGGATT CTGCGCACCC TGGGGGATCT GTTCATCGAA
ACCTTCAAGC AGGCCGGGCA TCTGGTGGGC TGA
|
|---|
| Protein sequence | MLTPEHAAQL VAHAVYITGL IVCVLVVPSL LGGLLVSIFQ AATQINEQML SFLPRLLITL
AMLVFAGHWI LRTLGDLFIE TFKQAGHLVG
|
|---|
| |