| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4408 |
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| Symbol | |
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| ID | 5107261 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4831617 |
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| End bp | 4832306 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640505674 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001189887 |
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| Protein GI | 146309422 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR02154] phosphate regulon transcriptional regulatory protein PhoB |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.0897949 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTGGCA AGAACATCCT GATCGTCGAT GACGAAGCAC CGATCCGCGA GATGATCGCG
GTGGCCCTGG AGATGGCCGG TTACGAGTGC CTGGAAGCGG AGAATACCCA GCAGGCTCAC
GCCGTGATCG TCGACCGCAA ACCCGATCTG ATCCTGCTCG ACTGGATGCT GCCCGGCACC
AGCGGCATCG AACTGGCCCG GCGCCTCAAG CGCGACGAGC TGACCAGCGA TATCCCGATC
ATCATGCTCA CCGCCAAGGG CGAAGAGGAC AACAAGATCC AGGGCCTGGA GGTCGGCGCC
GACGACTACA TCACCAAGCC GTTTTCGCCG CGCGAGCTGG TGGCCCGCCT CAAGGCCGTG
CTGCGCCGTG CCGGGCCCAG CGACAGCGAG GCGCCGATCG AGGTCGGCGG CCTGCTGCTC
GACCCCATCA GCCACCGCGT CACCATCGAC GGCAAACCGG CCGAGATGGG GCCGACCGAA
TACCGTCTGC TGCAGTTCTT CATGACCCAT CAGGAACGTG CCTACACCCG CGGCCAGTTG
CTCGACCAGG TCTGGGGCGG CAACGTCTAC GTCGAGGAGC GCACCGTCGA CGTGCATATC
CGCCGCCTGC GCAAGGCCCT CGGCGATGCC TACGAAAACC TGGTACAAAC CGTGCGCGGG
ACTGGGTATC GTTTCTCCAC CAAAGGCTGA
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| Protein sequence | MVGKNILIVD DEAPIREMIA VALEMAGYEC LEAENTQQAH AVIVDRKPDL ILLDWMLPGT
SGIELARRLK RDELTSDIPI IMLTAKGEED NKIQGLEVGA DDYITKPFSP RELVARLKAV
LRRAGPSDSE APIEVGGLLL DPISHRVTID GKPAEMGPTE YRLLQFFMTH QERAYTRGQL
LDQVWGGNVY VEERTVDVHI RRLRKALGDA YENLVQTVRG TGYRFSTKG
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