Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_4397 |
Symbol | |
ID | 5107250 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 4819557 |
End bp | 4821632 |
Gene Length | 2076 bp |
Protein Length | 691 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640505663 |
Product | ATP-dependent DNA helicase RecG |
Protein accession | YP_001189876 |
Protein GI | 146309411 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1200] RecG-like helicase |
TIGRFAM ID | [TIGR00643] ATP-dependent DNA helicase RecG |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.338064 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGAGC TGGCAGCGGT TTCCGTCACC GCGCTGAAAG GCGTAGGGGC TGCCCTGGCC GAGAAACTGG CCAAGGTCGG CCTGGAAAAC CTGCAGGACG TGCTGTTCCA CCTGCCGCTG CGCTACCAGG ATCGCACCCG CATCACCCCC ATCGGCGCGT TGCGTCCGGG GCAGGATGCG GTGGTCGAGG GCATCGTCGC GGGTGCCGAC GTGGTCATGG GCCGGCGCCG CAGCCTGCTG GTTCGTCTGC AGGACGGCAG CGGCACGCTG AGCCTGCGCT TCTTCCATTT CAGCCAGGCG CAGAAGGAAG GCCTGAAACG CGGCACGGCG CTGCGCTGCT ATGGCGAAGT ACGCCCCGGC GCCACCGGCC TGGAGATCTA CCACCCGGAG TACCGCGCGC AGAGCGGCGA CGAGCCGGCC CCGGTGGAAC AGAGCCTGAC CCCCATCTAC CCGACCACCG AAGGCCTGAC CCAGCAACGC CTGCGCCAGC TCAGCCAGCA GGCATTGGCG CGCCTGGGCC CACGCAGCCT GCCGGACTGG CTGCCCGATG AGCTGGCCCG TGACTATCGT CTGGCGCCGC TGGATGAGGC CATCCGCTAC CTGCACCGAC CGCCGCCGGA CGCCGATCTC GAAGAACTCG CCGAAGGCCG CCACTGGGCC CAGCATCGCC TGGCCTTCGA AGAGCTGCTG ACTCACCAGC TATCGCTGCA GCGCCTGCGT GAACAGGTGC GTGCGCAGCA GGCGCCAGCC CTGCCGCCGG CGCAGAAACT GCCGCAGCAG TACCTGGCCA ACCTCGGCTT CGCCCCCACC GGCGCGCAGC AGCGCGTGGG GGCCGAGATC GCCTACGACC TGGCGCAGAG CGAGCCCATG CTGCGCCTGG TGCAGGGCGA CGTCGGCGCC GGCAAGACCG TGGTCGCCGC GCTGGCCGCG CTGCAGGCGC TGGAGGCCGG TTACCAGGTG GCGCTGATGG CCCCCACCGA GATTCTCGCC GAGCAGCACT TTCTCAACTT CAGCAAATGG CTGGCGCCGC TGGGCCTGGA TGTCGCCTGG CTGGCCGGCA AGCTCAAGGG CAAGGCGCGC GCCAGCGCGC TGGAACAGAT CGCCGCCGGC TGCCCGATGG TGGTCGGCAC CCACGCCCTG TTCCAGGACG AAGTGAAGTT CAGGCGCCTG GCCCTGGTGA TCATCGACGA GCAGCACCGC TTCGGCGTGC AGCAGCGCCT GGCCCTGCGC CAGAAGGGCA TCGACGGCCG CCTCTGCCCG CACCAGTTGA TCATGACCGC CACGCCCATC CCGCGCACCC TGGCGATGAG CGCCTACGCC GATCTGGACA CCTCGATCCT CGACGAGCTG CCGCCGGGGC GCACCCCGGT CAACACCCTG GTGATCGCCG ACAGCCGCCG CATTGAGGTC ATCGAGCGGG TACGCAACGC CTGCCAGCAG GGGCGTCAGG CCTACTGGGT GTGCACCCTG ATCGAGGAAT CCGAGGAGCT CACCTGCCAG GCCGCGGAAA CCAGCTTCGA GGAGCTCTCC GCCGCGCTCG GCGAGCTGCG CGTCGGGCTG ATCCACGGGC GCATGAAACC GGCCGAGAAG GCCGCGGTGA TGGACGAGTT CAAGCAGGGC CACCTGCAGC TGCTGGTGGC CACCACGGTG ATCGAGGTGG GCGTCGACGT GCCCAACGCC AGCCTGATGA TCATCGAGAA CCCCGAGCGC CTGGGCCTGG CCCAGCTGCA CCAGCTGCGC GGCCGGGTCG GTCGCGGCAG CGCCGCCAGT CATTGCGTGC TGCTCTATCA CGCGCCATTG TCGCAACTGG GCCGCGAACG CCTGGCGATC ATGCGCGAGA CCACCGACGG TTTCGTTATC GCCGAGAAGG ATCTGGAGCT GCGCGGCCCC GGGGAAATGC TCGGTACCCG GCAGACCGGT CTGCTGCAAT TCAAGGTCGC CGACCTGATG CGCGACGCCG ACCTGCTGCC CGCCGTGCGC GATGCCGCGC AGGCACTATT GGAACATTGG CCACAACATG TGGCTCCATT GCTGGAGCGC TGGTTGCATC ACGGCCAGCA ATACGGTCAA GTGTGA
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Protein sequence | MSELAAVSVT ALKGVGAALA EKLAKVGLEN LQDVLFHLPL RYQDRTRITP IGALRPGQDA VVEGIVAGAD VVMGRRRSLL VRLQDGSGTL SLRFFHFSQA QKEGLKRGTA LRCYGEVRPG ATGLEIYHPE YRAQSGDEPA PVEQSLTPIY PTTEGLTQQR LRQLSQQALA RLGPRSLPDW LPDELARDYR LAPLDEAIRY LHRPPPDADL EELAEGRHWA QHRLAFEELL THQLSLQRLR EQVRAQQAPA LPPAQKLPQQ YLANLGFAPT GAQQRVGAEI AYDLAQSEPM LRLVQGDVGA GKTVVAALAA LQALEAGYQV ALMAPTEILA EQHFLNFSKW LAPLGLDVAW LAGKLKGKAR ASALEQIAAG CPMVVGTHAL FQDEVKFRRL ALVIIDEQHR FGVQQRLALR QKGIDGRLCP HQLIMTATPI PRTLAMSAYA DLDTSILDEL PPGRTPVNTL VIADSRRIEV IERVRNACQQ GRQAYWVCTL IEESEELTCQ AAETSFEELS AALGELRVGL IHGRMKPAEK AAVMDEFKQG HLQLLVATTV IEVGVDVPNA SLMIIENPER LGLAQLHQLR GRVGRGSAAS HCVLLYHAPL SQLGRERLAI MRETTDGFVI AEKDLELRGP GEMLGTRQTG LLQFKVADLM RDADLLPAVR DAAQALLEHW PQHVAPLLER WLHHGQQYGQ V
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