Gene Pmen_4388 details

Gene Information

• Locus tag: Pmen_4388
• Symbol: gmk
• ID: 5107241
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas mendocina ymp
• Kingdom: Bacteria
• Replicon accession: NC_009439
• Strand: +
• Start bp: 4811584
• End bp: 4812201
• Gene Length: 618 bp
• Protein Length: 205 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 640505654
• Product: guanylate kinase
• Protein accession: YP_001189867
• Protein GI: 146309402
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0194] Guanylate kinase
• TIGRFAM ID: [TIGR03263] guanylate kinase

Plasmid Coverage information

• Num covering plasmid clones: 33
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 32
• Fosmid unclonability p-value: 0.11044
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCCACAA CCGGCACCCT CTACATCATT TCCGCACCCT CCGGCGCCGG CAAGACCAGC 
CTGGTCAAGG CCCTGATCGA GAGCGAGGCG CAGATTCGCG TCTCGGTTTC GCACACCACC 
CGCGCCATGC GCCCGGGCGA GGTGGACGGG GTCAACTACC ACTTCGTCGA TCATGCGCAG 
TTCAACGCCA TGATCGAGCG CGGCGAGTTT CTCGAACACG CCCAGGTGTT CGACAACTTC 
TACGGCACCT CGCAGAAGTG GGTCGAGCAG ACCCTGGCCG AAGGCTTCGA TCTGATTCTG 
GAGATCGACT GGCAGGGCGC GCAGCAGGTA CGCAAGCTGA TGCCGCAGGC CAAGTCCATC 
TTCATCCTGC CGCCGACCCA GGAGGCCCTG CGCCATCGCC TGACCAACCG CGGCCAGGAC 
AGCGGCGAGA TCATCGAACG CCGTATGCGC GAGGCGGTCA GCGAAATGAG CCACTACGTC 
GAGTACGACT ACCTGGTGAT CAACGACGAC TTCAACCACG CCCTGAGCGA CCTGAAAGCC 
ATCTTTCGCA GCAACCAGTT GGCCCAGGCT CAGCAACAAC AGCGCCATGC CGGCCTGCTC 
AGTGAACTGC TGGCGTAA 

 

Protein sequence

MATTGTLYII SAPSGAGKTS LVKALIESEA QIRVSVSHTT RAMRPGEVDG VNYHFVDHAQ 
FNAMIERGEF LEHAQVFDNF YGTSQKWVEQ TLAEGFDLIL EIDWQGAQQV RKLMPQAKSI 
FILPPTQEAL RHRLTNRGQD SGEIIERRMR EAVSEMSHYV EYDYLVINDD FNHALSDLKA 
IFRSNQLAQA QQQQRHAGLL SELLA