| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4386 |
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| Symbol | rph |
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| ID | 5107239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4809772 |
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| End bp | 4810491 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640505652 |
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| Product | ribonuclease PH |
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| Protein accession | YP_001189865 |
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| Protein GI | 146309400 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0689] RNase PH |
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| TIGRFAM ID | [TIGR01966] ribonuclease PH |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.0782226 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGTC CCAGTGGCCG CGCCGCCGAT CAGTTGCGCT CGATTCGCAT CACCCGCAAC
TACACCAAGC ATGCCGAGGG TTCGGTGCTG GTCGAGTTCG GCGATACCAA GGTGATCTGC
ACCGTCAGCG TCGAATCCGG CGTGCCGCGT TTCCTCAAGG GCCAGGGCCA GGGTTGGCTG
ACTGCCGAAT ACGGCATGCT GCCGCGCGCC ACCGGCGAGC GTAACCAGCG CGAGGCCAGC
CGCGGCAAGC AGGGCGGCCG TACTCTGGAA ATCCAGCGCC TGATTGGCCG CTCGCTGCGC
GCTGCGCTGG ACATGAGCAA GCTGGGCGAG AACACCCTGT ACGTCGATTG CGACGTGATC
CAGGCCGACG GCGGCACCCG CACTGCCTCC ATCACCGGCG CCATGGTGGC GCTGATCGAC
GCGCTGAAGG TGCTGAAGAA GCGTGGTTCG CTCAAGGGCG AGCCGCTCAA GCAGATGATC
GCAGCGGTGT CGGTGGGCAT CTACCAGGGC GAGCCGGTGC TGGATCTGGA CTACCTGGAA
GATTCCGCCG CCGAGACCGA CCTCAACGTG GTGATGACCA ATGCCGGTGG CTTCATCGAG
GTGCAGGGCA CCGCCGAAGG CGCGCCGTTC CAGCCGGAGG AATTCAATGC CATGCTGGCG
CTGGCGCAGA AGGGCATGAA CGAGATCTTT GAACTGCAGA AAGCCGCTCT GGTCGACTGA
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| Protein sequence | MKRPSGRAAD QLRSIRITRN YTKHAEGSVL VEFGDTKVIC TVSVESGVPR FLKGQGQGWL
TAEYGMLPRA TGERNQREAS RGKQGGRTLE IQRLIGRSLR AALDMSKLGE NTLYVDCDVI
QADGGTRTAS ITGAMVALID ALKVLKKRGS LKGEPLKQMI AAVSVGIYQG EPVLDLDYLE
DSAAETDLNV VMTNAGGFIE VQGTAEGAPF QPEEFNAMLA LAQKGMNEIF ELQKAALVD
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