| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4383 |
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| Symbol | pyrE |
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| ID | 5107236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4807740 |
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| End bp | 4808381 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640505649 |
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| Product | orotate phosphoribosyltransferase |
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| Protein accession | YP_001189862 |
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| Protein GI | 146309397 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0461] Orotate phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR00336] orotate phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.101877 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAAGCGT ATCAGCGCGA TTTCATTCGC TTCGCCATCG AACGCGGGGT TCTGCGTTTC
GGTCAGTTCA CCCTCAAGTC CGGGCGCACC AGCCCCTATT TCTTCAATGC CGGTCTGTTC
GACAGCGGCC TGGCGTTGGC CCAGCTTGGG CGTTTCTACG CCGCCGCCAT CGTCGACAGC
GGCATCGACT TCGATGTGCT GTTCGGCCCG GCCTACAAGG GCATTCCGCT GGCCGCGACC
ACTGCGGTGG CGCTGGCCGA GCACCACGGT CGCGATCTGC CCTGGTGCTT CAACCGCAAG
GAAGCCAAGG ATCATGGCGA AGGCGGCACC CTGGTCGGCG CACCGCTCAA GGGGCGCGTG
CTGATCGTCG ATGACGTGAT CACCGCCGGT ACCGCCATTC GCGAAGTGAT GCAGATCATC
CAGGGGCAGG GCGCGCAGGC CGCCGGCACC CTGATCGCGC TGAACCGTCA GGAGCGCGGG
CAGGGCGATC TTTCCGCCAT TCAGGAAGTC GAGCGCGACT TCGGCATGCC GGTAGTGAGC
ATCGTGTCAC TGCAGCAGGT ACTGGAATAT CTGGCGGGGG ATGCTGAACT GAAGCAATAT
CTCCCGGCTG TCGAAGCCTA TCGCGCCGAG TACGGAATCT AG
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| Protein sequence | MQAYQRDFIR FAIERGVLRF GQFTLKSGRT SPYFFNAGLF DSGLALAQLG RFYAAAIVDS
GIDFDVLFGP AYKGIPLAAT TAVALAEHHG RDLPWCFNRK EAKDHGEGGT LVGAPLKGRV
LIVDDVITAG TAIREVMQII QGQGAQAAGT LIALNRQERG QGDLSAIQEV ERDFGMPVVS
IVSLQQVLEY LAGDAELKQY LPAVEAYRAE YGI
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