Gene Pmen_4374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4374 
SymbolrpmB 
ID5107227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4798199 
End bp4798435 
Gene Length237 bp 
Protein Length78 aa 
Translation table11 
GC content58% 
IMG OID640505640 
Product50S ribosomal protein L28 
Protein accessionYP_001189853 
Protein GI146309388 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0227] Ribosomal protein L28 
TIGRFAM ID[TIGR00009] ribosomal protein L28 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.335186 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAGAG TCTGTCAAGT TACCGGTAAG GGTCCGGTAA CCGGGAACAA CATTTCCCAC 
GCAAACAACA AAACCCGTCG TCGTTTCCTG CCGAACCTGC AGCACCATCG CTTCTGGGTC
GAGTCCGAGA AGCGCTTCGT GCGTCTGCGC GTATCCGCCA AGGGCATGCG TGTGATCGAC
AAGCGTGGCA TCGACGTAGT GCTGGCCGAG CTGCGCGCTC GCGGCGAAAA GGTTTAA
 
Protein sequence
MSRVCQVTGK GPVTGNNISH ANNKTRRRFL PNLQHHRFWV ESEKRFVRLR VSAKGMRVID 
KRGIDVVLAE LRARGEKV