Gene Pmen_4327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4327 
Symbol 
ID5107101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4740488 
End bp4741822 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content67% 
IMG OID640505593 
Productchromate transporter 
Protein accessionYP_001189806 
Protein GI146309341 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2059] Chromate transport protein ChrA 
TIGRFAM ID[TIGR00937] chromate transporter, chromate ion transporter (CHR) family 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.685407 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAGT CCCCTGAGCG TCCCGCCCCG GTCAGTTTGC TGCAGGCCTT CTGGTTCTGG 
TTGAAGCTGG GGTTGATCAG TTTCGGTGGG CCGGCGGGGC AGATTTCGAT CATGCATCAG
GAGTTGGTGG AGAAACGCCG CTGGTTGTCC GAGCGGCGTT TTCTGCATGC GCTGAACTAC
TGCATGTTGC TGCCCGGGCC GGAGGCGCAG CAGTTGGCCA CGTATATCGG CTGGCTGATG
CACCGCACCT GGGGCGGGGT GATCGCAGGG GTGCTGTTCG TGCTGCCGTC GCTGCTGATT
CTGGTCGCGC TGTCCTGGGT CTATCTGGTG TTCGGTGACG TGCCGCTGGT GGCCGGGATC
TTCTACGGCA TCAAGCCGGC GGTGACCGCC ATCGTGGTGC AGGCGGCCTG GCGCATTGGC
GGTCGGGCGC TGAAGAATCG CTGGCTGTGG GCGATTGCCG CGGCGGCCTT CGTGGCCATC
TTCGTGCTGC AGCTGCCGTT CCCGCTGATC GTGCTCGGTG CGGCGCTGCT CGGTTACATC
GGCGGACAGT TGGCGCCGCA GCATTTCGCC GTCGGCGGCG GCCACGGTGC GGCGGACAAG
TCCTATGGCG CGGCGCTGAT CGAGGACGAT ACCCGCCTGA CGCATACCCG CTTCCGTCTG
CCGCGCCTGG CGCTGATTCT GCTGGTGGGT GCTGCGCTGT GGCTGCTGCC CATGGGCCTG
CTGACCCTGG CGTTCGGCTG GGACGGCAGC CTGACGCAGA TGGGCTGGTT CTTCACCAAG
GCGGCGCTGC TGACGTTCGG CGGTGCTTAT GCGGTGCTGC CCTATGTCTA TCAGGGCGCG
GTCGGCTACT ACGGCTGGCT GACGCCGACG CAGATGATCG ATGGTCTGGC CCTGGGCGAG
ACCACACCGG GGCCGCTGAT CATGGTGGTG GCCTTCGTCG CCTTCGTTGG CGCCTATGGG
CAGCCGGTGT TCGGTGGCGA TTCGGCCTTC GCCAGTGGCG CGCTGGCAGC TTGCCTGGTC
ACCTGGTTCA CCTTCCTGCC GTCGTTCTTG TTCATCCTCG CCGGCGGGCC GCTGGTGGAG
TCGACCCATG GCGAGCTGAA GTTCACCGCG CCGCTGACCG GCATCACCGC CGCCGTGGTG
GGGGTGATCC TCAACCTGGC GCTGTTCTTC GGGTACCACG TGTTGTGGCC GGAGGGCTTC
GCCGGCACGT TCGACTGGGT ATCGGCGTTG ATCGCCAGCG GGGCGGCGTT GGCCCTGTTC
AAGTTCAAGC GCGGGGTGAT CGAGACCATC GTCGGGTGCG CCGCGGTGGG GCTGGCGGCG
CACCTGCTGC TATAG
 
Protein sequence
MSESPERPAP VSLLQAFWFW LKLGLISFGG PAGQISIMHQ ELVEKRRWLS ERRFLHALNY 
CMLLPGPEAQ QLATYIGWLM HRTWGGVIAG VLFVLPSLLI LVALSWVYLV FGDVPLVAGI
FYGIKPAVTA IVVQAAWRIG GRALKNRWLW AIAAAAFVAI FVLQLPFPLI VLGAALLGYI
GGQLAPQHFA VGGGHGAADK SYGAALIEDD TRLTHTRFRL PRLALILLVG AALWLLPMGL
LTLAFGWDGS LTQMGWFFTK AALLTFGGAY AVLPYVYQGA VGYYGWLTPT QMIDGLALGE
TTPGPLIMVV AFVAFVGAYG QPVFGGDSAF ASGALAACLV TWFTFLPSFL FILAGGPLVE
STHGELKFTA PLTGITAAVV GVILNLALFF GYHVLWPEGF AGTFDWVSAL IASGAALALF
KFKRGVIETI VGCAAVGLAA HLLL