Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_4316 |
Symbol | |
ID | 5107090 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 4731079 |
End bp | 4731906 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640505582 |
Product | sulfate ABC transporter, inner membrane subunit CysW |
Protein accession | YP_001189795 |
Protein GI | 146309330 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4208] ABC-type sulfate transport system, permease component |
TIGRFAM ID | [TIGR00969] sulfate ABC transporter, permease protein [TIGR02140] sulfate ABC transporter, permease protein CysW |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.356778 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGAAAC CTCAAGGTTG GCGCCAATGG GCGCTGGTAA CGCTCGGTCT GACGCTGGTG GCACTGGTGC TGCTGGTGCC GCTGGCGCTG ATCTTCAGCA AGGCCCTGGC CGGTGGTCTC GATCTGCTGT GGAGCAACCT GAACGAAGAC TACATGCGCC ACGCCATCGG CCTGACCCTG CTGGTGGCGG TGATCACCGT GCCGCTGAAC CTGTGCTTCG GCATCTGCCT GGCCTGGTGC GTGACCCACT ACGACTTTCG CGGGCGCAAG CTGCTGACCA CCCTGATCGA CATTCCCTAC GCGGTGTCGC CGGTGGTCGC CGGCCTCTGC TACCTGGTGG TCTACGGCCT GGAGAGCTTC ATTGGCCGCT GGTTCTACGA TAACGGCATG CAGCTGATGT TCGCCTGGCC GGGCATCGTC ATGGTCACGG TGTTCGTCAC CGCGCCCTAC GTGGCGCGCA TCCTGATTCC GGTGATGCAG GCCCAGGGCC AGGACGAGGA AGTGGCCGCC ATGTGCCTGG GCGCCAGCGG CTGGCAGATC TTCCGCCGCA TCACCCTGCC GAAGATCAAG TGGGCGCTGC TGTACGGCGT GGTGGTAACC AATGCGCGGG CGGTGGGCGA GTTCGGCGCG GTATCGGTGG TGTCCGGCAG CATCATCAAC CAGACCCTGA CCCTGCCGCT GCTGGTCGAT CAGCTCAACA ACGACTACAA GCCCGCTGCG GCGTTCACCG CTGCCGGCCT GCTGGCGTGC ATGGCGCTGC TCACCCTGTT CCTGAAAACC TTCATGGAGT GGCGTCAGCG CCAGCTGATG CAACGCGCCG AGGCCTGA
|
Protein sequence | MKKPQGWRQW ALVTLGLTLV ALVLLVPLAL IFSKALAGGL DLLWSNLNED YMRHAIGLTL LVAVITVPLN LCFGICLAWC VTHYDFRGRK LLTTLIDIPY AVSPVVAGLC YLVVYGLESF IGRWFYDNGM QLMFAWPGIV MVTVFVTAPY VARILIPVMQ AQGQDEEVAA MCLGASGWQI FRRITLPKIK WALLYGVVVT NARAVGEFGA VSVVSGSIIN QTLTLPLLVD QLNNDYKPAA AFTAAGLLAC MALLTLFLKT FMEWRQRQLM QRAEA
|
| |