| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4312 |
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| Symbol | |
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| ID | 5107086 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4724166 |
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| End bp | 4726088 |
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| Gene Length | 1923 bp |
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| Protein Length | 640 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640505578 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_001189791 |
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| Protein GI | 146309326 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5002] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAAG CCCCCATCCC CAGCAACGAA CAGCAACGCC TGGCAGCCCT GCACGCCCTG
GAACTGCTCG ACACCCCGGC CGAGGCGATG TTCGATCACA TCACCGCACT GGCTGCGCAA
ATCTGCGAAA CGCCCATTGC CCTGATCTCG CTGGTCGATG CCCAACGCCA GTGGTTCAAG
AGCCGGGTCG GCCTGGATGC CGAGCAGACC GCCCGCGAGC TGGCCTTCTG CGCCCACGCC
GTGCATGCCG ATGCCCTGCT GGAAGTGGGC AACGCCCTGG ATGACGCACG TTTTCGCGAC
AATCCGCTGG TCACCTCCGA CCCCAGCATC CGCTTCTATG CCGGCATGCC GCTGCACGAT
GGCCAGGGCC TGGCCCTGGG CACCCTGTGC GTGATCGACC GCCGTCCACG CCAGCTCGAC
GAGCACCAGC GCCAGCAACT GCGACACCTG GCCCAGCTCA CCGGCGAGCT GTTCGAACTG
CGCCTGCAGG CGCGCCGCCA GGCCGAGCAG AGCGCCATGC ATCAGGCCAT GCTGGACAAC
GCCGGCAGCG CGGTGCTGGT GCTCGACCCG CAGGGCCGGG TTCAGCGCAG CAATCCCGAG
GCCCGGCAGT TGCTGGGCTA TTCGGCCGAG GCGCTGAACG AACAGCACCT GCCGCAGCTG
CTGGAGGAAC CCGGCCAGTT CGAGCGCCTG TGCCTGGCCT GCGCCAGAGG CCCGCAGAGC
GCCGAGGGAC GGTTGCGCCC GCGCCACGGG CAGAGCCTGC CGGTGCGCCT GAATCTTTCG
CCGATCCGCG CCGAGGGCCA GGCACTGCAG GGCTACCTGC TGGTGGCCAA CGACCTCAGC
CAGCGCGACG AGGCCCGCCA GCGCCTGCAG CGCATCGCCG CACAACTGCC GGGGATGGTC
TACCAGTACT TGCTGCGCGC CGACGGCAGC AGCTGCTTCC CCTATTCCAG CGCCGGTATC
CGCGACATCT ACGGCTGCAC GCCGGAGGAG GTCTGCCAGG ACGCGGCCTC GGCATTCGCC
CGCCTGCACC CGGAGGACAC CGCGCCAGTA CGCGAGGCCA TCGCCGACTC GGCGCAGCGC
CTGGCCACCT GGCACCAGGA GTACCGCGTG CTGCATCCCG AGCGGGGCTT GATCTGGGTC
GAGGGCCGCG CCGCGCCGCA GCGACTGCCC GGCGGCGAAG TTCTCTGGCA CGGTTTCATC
AGCGATATCA GCGAACGCAA ACGCGGCGAG CAGCTGCAGA ACGAATTCGT CTCCACCGTC
AGCCACGAGC TGCGCACCCC GCTCACCGCC ATCGCCGGTT CGCTGGGCCT GATCAACGGC
GGCGCCCTCG GCGCGGTACC GGAGAACATG CAGCAGATGC TGGAAATCGC GCAGAGCAAC
AGCCAGCGCC TGCGCCACCT GATCGACGAC CTGCTGGACA TGGACAAGCT GGTCGCCGGC
AAGATGCGTT TCGATCTGCA GCCGCTGGCC CTGCGCCCCC TGCTGCAGCA GGCGCTGCAC
GACAACCAGC CGTATGCCGA GCGCCAGCAG GTCCGGCTGC AGCTGCTGGC CGGCAGCGAC
TGCCAGGTAC TGGCCGATGC CAAGCGCGTC GAGCAGGTAC TGGCCAACCT GCTGGCCAAC
GCCGCCAAGT TCTCCAGCCC CGGCCAGCCT GTCGAACTGT CCGCCGCACC GCGCGACGGC
TGGGTCAGAA TCAGCGTGCG CGACCAGGGC CTGGGCATCC CGACCAGCTT CAAGCCGCGC
ATCTTCAGCA AGTTCGCCCA GGCCGACGCC GGGGACACCC GCCAGCAGGG CGGCACCGGC
CTGGGTCTGG CGATCAGCAA GGAGCTGATC GAACGCATGG GCGGACGGAT CGGCTTCGAC
TCGCAGGAGG GTCAGGGCAG CACCTTCTGG TTCGAGCTGC CATTGGCCGG GGGGCAGTCA
TGA
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| Protein sequence | MSQAPIPSNE QQRLAALHAL ELLDTPAEAM FDHITALAAQ ICETPIALIS LVDAQRQWFK
SRVGLDAEQT ARELAFCAHA VHADALLEVG NALDDARFRD NPLVTSDPSI RFYAGMPLHD
GQGLALGTLC VIDRRPRQLD EHQRQQLRHL AQLTGELFEL RLQARRQAEQ SAMHQAMLDN
AGSAVLVLDP QGRVQRSNPE ARQLLGYSAE ALNEQHLPQL LEEPGQFERL CLACARGPQS
AEGRLRPRHG QSLPVRLNLS PIRAEGQALQ GYLLVANDLS QRDEARQRLQ RIAAQLPGMV
YQYLLRADGS SCFPYSSAGI RDIYGCTPEE VCQDAASAFA RLHPEDTAPV REAIADSAQR
LATWHQEYRV LHPERGLIWV EGRAAPQRLP GGEVLWHGFI SDISERKRGE QLQNEFVSTV
SHELRTPLTA IAGSLGLING GALGAVPENM QQMLEIAQSN SQRLRHLIDD LLDMDKLVAG
KMRFDLQPLA LRPLLQQALH DNQPYAERQQ VRLQLLAGSD CQVLADAKRV EQVLANLLAN
AAKFSSPGQP VELSAAPRDG WVRISVRDQG LGIPTSFKPR IFSKFAQADA GDTRQQGGTG
LGLAISKELI ERMGGRIGFD SQEGQGSTFW FELPLAGGQS
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