| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4306 |
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| Symbol | |
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| ID | 5107080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4712670 |
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| End bp | 4713983 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640505572 |
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| Product | outer membrane porin |
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| Protein accession | YP_001189785 |
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| Protein GI | 146309320 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAAGA CCTCCCTGGC ACTGGCCGTA GCCGCCAGCA CCCTGGGCCT GAGCCAAGTA
GCCGTTGCTG ACTTCATCGG CGACAGCAAG GCCAACCTGA CTCTGCGCAA CTTCTACTTC
GACCACAACA CCAAGAACAC CGCGAATAAC GAGGGTGAAG CGAAGGAGTG GGGCCAAGGC
TTCATCTTCA ACTACACCTC CGGTTTCACC GAAGGCACCG TAGGCTTCGG TGTTGATGCG
GTAGGCCTGC TGGGTGTGAA GCTGGACTCC GGTGGCCGTG CCAACAAGAC TGGTCGTGAT
CGCACCCCGG GTGCTCTGTT CCCGCTGGAA AGCGATGGCA GCGCCGTTGA CGAGTTCAGC
AAGGGCGGTC TGACCGGTAA GGTCCGTGTT TCCAAGACCG AGGCACGTAT CGGCACCCTG
ACGCCGCGCC TGCCGATCCT GGTATCCAAC GACGGCCGTC TGCTGCCGCA GTTGTTCGAA
GGTGGTCAGA TCACCTCCAA CGAAATCGAC AACCTGACCC TGACTGCCGG TCAGATCGAG
CACGCCGTAG GCCGTGCTTC GAGCAACAGC ACCGGTCTGT CGGTTGCCGG CGGCAGCGAA
GCCAGCAACA AGTTCTACTT CGCCGGTGGT GACTGGAAAG TAAACAGCGA CCTGACTGCT
CAGTACTACT ACGCCAACCT CGAAGACTAC TACAAGCAGC ACTTCGCCGG CCTGGGCCAC
AACCTGGCGC TGGGTGAAGG CACCCTGAAG ACCGATCTGC GCTATTTCCG CACCACTTCC
GATGGCAAGA ACGGCAAAGA AGCCGGCTAC TCGGTGGGCG GCTACACCCG TAATGGCGAT
GGCAAGATCG ACAACAACAC CTGGAGCGCC GCGTTCACTT ACAGCCTGGG CAGCCACGCC
GTGATGCTGG GTCATCAGCG CGTTTCTGAA GACAGCAACT TCGTGCAGCT GAACCAGGGT
GGCATCGAAG GCTCCGCTGG TGCCAGCGTG TACCTGCTGA CCGACCGCCT GGTTAACAGC
TTTACCCGTG CCGGCGAACG CACCACCTTC GGTCAGTACA GCTACGATTT CGCCAACCTG
GGTGCTCCGG GTCTGAAAGC GTCGGTGATC TACCTGAAAG GCACCAACAT TCAGGTTGCT
GGCGCCAACG AGGCCAAGGA GTGGGAGCGC GACATCGCCC TGGATTACGT GTTCCAGGAA
GGTGCCCTGA AGGGTCTGGG TCTGGGCTGG CGCCACGGTG TGCTGCGTGG CAACGCTGCA
ACCGACGCCG ACCAGAACCG TCTGATCGTC AGCTACACCC TGCCGCTGCT GTAA
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| Protein sequence | MRKTSLALAV AASTLGLSQV AVADFIGDSK ANLTLRNFYF DHNTKNTANN EGEAKEWGQG
FIFNYTSGFT EGTVGFGVDA VGLLGVKLDS GGRANKTGRD RTPGALFPLE SDGSAVDEFS
KGGLTGKVRV SKTEARIGTL TPRLPILVSN DGRLLPQLFE GGQITSNEID NLTLTAGQIE
HAVGRASSNS TGLSVAGGSE ASNKFYFAGG DWKVNSDLTA QYYYANLEDY YKQHFAGLGH
NLALGEGTLK TDLRYFRTTS DGKNGKEAGY SVGGYTRNGD GKIDNNTWSA AFTYSLGSHA
VMLGHQRVSE DSNFVQLNQG GIEGSAGASV YLLTDRLVNS FTRAGERTTF GQYSYDFANL
GAPGLKASVI YLKGTNIQVA GANEAKEWER DIALDYVFQE GALKGLGLGW RHGVLRGNAA
TDADQNRLIV SYTLPLL
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