Gene Pmen_4260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4260 
Symbol 
ID5107034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4664388 
End bp4664660 
Gene Length273 bp 
Protein Length90 aa 
Translation table11 
GC content61% 
IMG OID640505524 
Producthypothetical protein 
Protein accessionYP_001189739 
Protein GI146309274 
COG category[C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2924] Fe-S cluster protector protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.221746 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00000000242965 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCCGCA CCGTGCTGTG CCGCAAATAC AAACAGGAAC TGCCCGGCCT GGATCGCGCG 
CCCTACCCCG GCCCCAAGGG CGAAGACATC TTCGCCAACG TTTCCAAGCA GGCCTGGGAC
GAGTGGCAGA AGCACCAGAC CATGCTGATC AACGAGCGTC GCCTGAACAT GATGAACGCC
GAGGATCGCA AGTTCCTGCA GACCGAGATG GACAAGTTCC TCTCCGGCGA GGAATACGCC
CAGGCCGAAG GCTACGTGCC GCCGAGCGAA TAA
 
Protein sequence
MTRTVLCRKY KQELPGLDRA PYPGPKGEDI FANVSKQAWD EWQKHQTMLI NERRLNMMNA 
EDRKFLQTEM DKFLSGEEYA QAEGYVPPSE