| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4250 |
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| Symbol | |
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| ID | 5106674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4654865 |
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| End bp | 4655620 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640505514 |
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| Product | amino acid ABC transporter periplasmic protein |
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| Protein accession | YP_001189729 |
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| Protein GI | 146309264 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.00190529 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTCAAAC GCCTGCTACT CGCGCTAGGC GGCACCCTTG TGGTGCTGAC CGGTGCTGCG
CGCGCCGAAG TGGACCCGAA CTACAGCGTG GTCCTGCTGA CCGAGAACTT CCCGCCGTAC
AACATGGCGA TCAATGGCAA GAACTTCGCC CAGGAAGACA ACATCGACGG CATCGCCGTG
GACATCGTCA AGGAGATGTT CAAGCGTGCC GGGGTCAAGT ACAACCTGAC GCTGCGTTTT
CCCTGGGATC GCATCTACAA GCTGGCGCTG GAGAAACCGG GCTACGGCGT CTTCGTTACG
GCTCGTCTGC CGGAGCGTGA GCAGCTGTTC AAGTGGGTCG GCCCGATCGG ACCGGATGAC
TGGGTGCTGC TGGCCAAGGG CGACAATCCC ATCAACCTCG CCAGCCTGGA CAAGGCCAAG
CAATACCGCG TCGGCGCCTA CAAGGGCGAT GCCATCTCCG AATACCTGAC CGAGAAGGGC
GTCGAGCACA GCGCCTCGTT GCGTGACCAG GAAAACGCCA GGAAGCTCGT GGCCGGCCAG
ATCGATCTCT GGGCCACCGG TGATCCTGCG GGTCGCTACC TGGCCAAGCA GGAGGGCATT
TCCGGCCTGC GCACGGTGCT GCGTTTCGAC AGCGCCGAGC TGTACCTGGC GCTGAACCGG
GACGTGCCCG ACGAGATTGT CGCCAGACTG CAGGCAGCCC TCGACCAAAT GCGCAGCGAA
GGCTTCGTCG ACGATATTCT CAACAGCTAC TTGTAA
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| Protein sequence | MFKRLLLALG GTLVVLTGAA RAEVDPNYSV VLLTENFPPY NMAINGKNFA QEDNIDGIAV
DIVKEMFKRA GVKYNLTLRF PWDRIYKLAL EKPGYGVFVT ARLPEREQLF KWVGPIGPDD
WVLLAKGDNP INLASLDKAK QYRVGAYKGD AISEYLTEKG VEHSASLRDQ ENARKLVAGQ
IDLWATGDPA GRYLAKQEGI SGLRTVLRFD SAELYLALNR DVPDEIVARL QAALDQMRSE
GFVDDILNSY L
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