| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4248 |
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| Symbol | |
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| ID | 5106672 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4652499 |
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| End bp | 4653815 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640505512 |
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| Product | carboxyl-terminal protease |
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| Protein accession | YP_001189727 |
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| Protein GI | 146309262 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.00499045 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCTCATC GCTTCCGCCC CACCTGCCTG GCCCTGGCCC TCGGGCTGCT GCTCGGCGTT
CCAGCCCTGC ACGCGGCCGA GCCTGCCCCC GCGCCGGCAG CGGCGGCGAG CGGCAAGGCA
CCGCTGCCGC TGGATGATCT GCGCACCTTC GCCGAGGTGA TGGACCGCAT CAAGGCCGCC
TATGTCGAGC CGGTGAGCGA CAAGACCCTG CTGGAGAATG CCATCAAGGG CATGCTCAGC
AACCTCGACC CGCATTCGGC CTACCTGGAA CCCGAGGCCT TCCTCGAACT GCAGGAGAGC
ACCAGCGGCG AGTTCGGCGG ACTGGGCATC GAGGTCGGCA TGGAGGATGG CTTCGTCAAG
GTGGTCTCGC CGATCGATGA CACCCCGGCG TCCAAGGCCG GCATCCAGCC CGGCGACCTG
ATCGTCAAGA TCGACGGCCA GCCGACCAAG GGCCTGTCGA TGATGGAGGC CGTGGACAAG
ATGCGCGGCA AGGCCGGCAG CAAGATCGAG CTGACCCTGG TACGCGACGG CGGCCGCCCG
TTCGACCTGA CCCTGACCCG CGCGGTGATC AAGGTACGCA GCGTCAAGAG CCAGATGCTC
GAGGACGGCT ACGGCTACCT GCGCATCTCG CAGTTCCAGG TCAACACCGG CGAGGAAGTC
GGCAAGGCGC TGACCAAGCT GCGCCAGGAG AACGGCAACA AGAAGCTGCG CGGCCTGGTG
ATGGATCTGC GCAACAACCC CGGCGGCGTG CTGCAGGCGG CGGTGGAAGT CACCGATCAC
TTCCTCAAGA GCGGCCTGAT CGTCTACACC GAGGGCCGCC TGGCCAACTC CGAGCTGCGC
TTCAATGCCG ACCCGGCCGA CGCCAGCGAG GGCGTGCCGC TGGTGGTGCT GATCAATGGC
GGCAGCGCCT CGGCTTCGGA AATCGTCGCC GGCGCCCTGC AGGACCACAA GCGCGCGGTG
CTGATGGGCA CCGACAGTTT CGGCAAGGGC TCGGTGCAGA CCGTGCTGCC GCTGAACAAC
GACCGCGCCC TGAAGCTGAC CACTGCGCTG TACTTCACCC CCAACGGCCG CTCGATCCAG
GCCCAGGGCA TCGTCCCCGA CATCGAAGTG GCGCGCGCCA AGGTGACGCG CGAACAGGAC
ATCGAGGGCG TCAAGGAAGC CGATCTGCAA CGTCACCTGG GCAACGGCAA CGGCGGCGCC
GATCGCCCGA GCAAGGCCGC GCAGGCCGCT CGCGCCGAAC GCCCGCAGGA CGACGACTAC
CAGCTGAGCC AGGCGCTCAA CCTGCTCAAG GGCCTGAGCG TCACCCGCGG CAACTGA
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| Protein sequence | MSHRFRPTCL ALALGLLLGV PALHAAEPAP APAAAASGKA PLPLDDLRTF AEVMDRIKAA
YVEPVSDKTL LENAIKGMLS NLDPHSAYLE PEAFLELQES TSGEFGGLGI EVGMEDGFVK
VVSPIDDTPA SKAGIQPGDL IVKIDGQPTK GLSMMEAVDK MRGKAGSKIE LTLVRDGGRP
FDLTLTRAVI KVRSVKSQML EDGYGYLRIS QFQVNTGEEV GKALTKLRQE NGNKKLRGLV
MDLRNNPGGV LQAAVEVTDH FLKSGLIVYT EGRLANSELR FNADPADASE GVPLVVLING
GSASASEIVA GALQDHKRAV LMGTDSFGKG SVQTVLPLNN DRALKLTTAL YFTPNGRSIQ
AQGIVPDIEV ARAKVTREQD IEGVKEADLQ RHLGNGNGGA DRPSKAAQAA RAERPQDDDY
QLSQALNLLK GLSVTRGN
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