| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4246 |
|---|
| Symbol | |
|---|
| ID | 5106670 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | + |
|---|
| Start bp | 4649562 |
|---|
| End bp | 4651094 |
|---|
| Gene Length | 1533 bp |
|---|
| Protein Length | 510 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640505510 |
|---|
| Product | phosphoglyceromutase |
|---|
| Protein accession | YP_001189725 |
|---|
| Protein GI | 146309260 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0696] Phosphoglyceromutase |
|---|
| TIGRFAM ID | [TIGR01307] 2,3-bisphosphoglycerate-independent phosphoglycerate mutase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.0255535 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGCCA CGCCAAAACC CTTGGTTCTG ATCATCCTCG ACGGCTTCGG TCACAGCGAC
AAACCCGAAT ACAACGCCAT CCACGCCGCC AGCACGCCGG TCTACGACCG TCTGCGTGCC
ACCTACCCGC ATGGCCTGAT CTCCGGCAGC GGCATGGACG TGGGCCTGCC GGACGGGCAG
ATGGGCAACT CCGAAGTCGG CCACATGAAC CTCGGCGCCG GTCGCGTGGT GTACCAGGAC
TTCACCCGCG TGACCAAGGC AATCCGCGAC GGCGAGTTCT TCGATAACGC GGCGATCAAC
CAGGCCGTGG ACAAGGCCGT GGCCGCCGGC AAGGCCGTGC ACATCCTCGG TCTGCTCTCC
GACGGCGGCG TCCACAGCCA TCAGGATCAC ATCGTCGCCA TGGCCGAGCT GGCCGCCAGG
CGCGGTGCCG AGAAGATCTA CCTGCACGCC TTCCTCGACG GCCGCGACAC CCCGCCGAAA
AGCGCGCAGC CGTCCATCGA GCTGCTCGAC GCCGCCTTCG CCCGACTCGG CAAGGGCCGC
ATCGCCAGCC TCACCGGCCG TTATTTCGCC ATGGACCGCG ACAACCGCTG GGACCGCGTC
GAGCAGGCCT ACCACCTGAT CGTCGACGGC GCCGGCCAGT TCAACGCCGC CAGCGCCGTG
GAAGGCCTGC AGGCTGCCTA CGAGCGCGGC GAGAGCGACG AGTTCGTCAA GGCCACCACC
ATCGGCGCGC CGGTGCAGGT GGAAGACGGC GACGCCGTGG TGTTCATGAA CTTCCGCGCC
GACCGCGCCC GCGAGCTGAC CCGTGCCTTC GTCGAGCCCG GCTTCCAGGA ATTCGAGCGC
AAGCGCGCGC CGCAGGTCGG CTTCGTCATG CTCACCCAGT ACGCGGCGAG TATCCCGGCG
CCCGCCGCCT TCGCCCCGGA AGCGCTGACC AACGTGCTCG GCGAATACCT GGCGAAGAAC
GGCAAGACCC AGCTGCGCAT CGCCGAGACC GAGAAATACG CCCACGTCAC CTTCTTCTTC
TCCGGCGGGC GCGAAGAGCC GTTCGAGGGC GAAGAGCGCA TCCTCATCCC CTCGCCGGAC
GTCGCCACCT ACGATCTGAA GCCGGAAATG AGCGCGCCGG AAGTCACCGA CAGGATCGTC
GATGCCATCG AGAACCAGCG TTACGACGTG ATCATCGTCA ACTACGCCAA CGGCGACATG
GTCGGCCATA CCGGCGTGTT CGAGGCGGCG GTCAAGGCCG TGGAAACCCT CGACACCTGC
GTCGGCCGCA TCACCGAGGC GCTGCAGAAG GTGGGCGGCG AGGCGCTGAT CACCGCCGAC
CACGGCAACG TCGAGCAGAT GGAAGACGAA TGCACCGGCC AGGCGCACAC CGCGCACACC
TGCGAGCCGG TGCCGTTCAT CTACGTCGGC AAGCGCCCGG CGCGCATCCG CGAAGGCGGC
GTGCTGGCCG ACGTGGCGCC CACCCTGCTG ACCCTGATGG GCCTGCCGCA GCCCGCGGAA
ATGACCGGCA AGACCATCGT CGAGCTCGAA TAA
|
|---|
| Protein sequence | MSATPKPLVL IILDGFGHSD KPEYNAIHAA STPVYDRLRA TYPHGLISGS GMDVGLPDGQ
MGNSEVGHMN LGAGRVVYQD FTRVTKAIRD GEFFDNAAIN QAVDKAVAAG KAVHILGLLS
DGGVHSHQDH IVAMAELAAR RGAEKIYLHA FLDGRDTPPK SAQPSIELLD AAFARLGKGR
IASLTGRYFA MDRDNRWDRV EQAYHLIVDG AGQFNAASAV EGLQAAYERG ESDEFVKATT
IGAPVQVEDG DAVVFMNFRA DRARELTRAF VEPGFQEFER KRAPQVGFVM LTQYAASIPA
PAAFAPEALT NVLGEYLAKN GKTQLRIAET EKYAHVTFFF SGGREEPFEG EERILIPSPD
VATYDLKPEM SAPEVTDRIV DAIENQRYDV IIVNYANGDM VGHTGVFEAA VKAVETLDTC
VGRITEALQK VGGEALITAD HGNVEQMEDE CTGQAHTAHT CEPVPFIYVG KRPARIREGG
VLADVAPTLL TLMGLPQPAE MTGKTIVELE
|
|---|
| |