| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4223 |
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| Symbol | |
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| ID | 5106647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4628666 |
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| End bp | 4629379 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640505487 |
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| Product | ribose-5-phosphate isomerase A |
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| Protein accession | YP_001189702 |
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| Protein GI | 146309237 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0120] Ribose 5-phosphate isomerase |
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| TIGRFAM ID | [TIGR00021] ribose 5-phosphate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATGGCT ATAATTGCGC TTTTCCCGTC CGGCAGAACT CCATGACCCA GGATCAGCTC
AAGCAGGCGG TGGCCCAGGC CGCCGTCGAC CACATTCTCC CGCGCCTCGA CAGCAAGAGC
ATCGTCGGCG TCGGCACTGG CTCCACCGCC AACTTCTTCA TCGACGCGTT GGCCAGGCAC
AAGATGGACT TCGACGGCGC CGTGGCCAGC TCCGAAGCCA CGGCCGCCCG CCTCAAGGGC
CATGGCATCC CGGTCTACGA CCTCAACAGC GTCAGCGAGC TGGAGTTCTA TGTCGATGGC
GCCGACGAGA GCGACGAGCG CCTGCACCTG ATCAAGGGCG GCGGCGCCGC GCTGACCCGC
GAGAAGATCG TCGCCGCCGT GGCCAAGACC TTCATCTGCA TCGCCGATGC CAGCAAGCTG
GTGCCGGTGC TCGGCGCCTT CCCGCTGCCG GTGGAGGTGA TCCCCATGGC CCGCAGCCAC
GTGGCCCGCG AGCTGGTGAA GCTGGGCGGC GACCCGGTGT ACCGCGAGGG CGTGCTGACC
GACAACGGCA ACGTCATCCT CGACGTGCAC AACCTGTCGA TCACCGACCC GGTGAAGCTG
GAGGCGGACA TCAACGCCAT CGTCGGCGTG GTCACCAACG GCCTGTTCGC CGCCCGCCCG
GCCGACCTGC TGCTGCTCGG CACCGCCGAA GGCGTGAAAA CGCTCAAGCG CTGA
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| Protein sequence | MDGYNCAFPV RQNSMTQDQL KQAVAQAAVD HILPRLDSKS IVGVGTGSTA NFFIDALARH
KMDFDGAVAS SEATAARLKG HGIPVYDLNS VSELEFYVDG ADESDERLHL IKGGGAALTR
EKIVAAVAKT FICIADASKL VPVLGAFPLP VEVIPMARSH VARELVKLGG DPVYREGVLT
DNGNVILDVH NLSITDPVKL EADINAIVGV VTNGLFAARP ADLLLLGTAE GVKTLKR
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