Gene Pmen_4215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4215 
Symbol 
ID5106639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4619660 
End bp4620442 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content66% 
IMG OID640505479 
Producthypothetical protein 
Protein accessionYP_001189694 
Protein GI146309229 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTGC TGCTCTACCT GGTGCTGGGT GCGGCCGCCG GTGTGCTGGC TGGCCTGTTC 
GGCGTGGGTG GCGGGTTGAT CATCGTGCCG GTGCTGGTGC TGAGCTTCAC CTCGCAGGGC
ATGCCGAGCG AGATCCTCAC CCACCTGGCG GTAGGCACCT CGCTGGCGAC CATCGTCTTC
ACCTCGATCA ATTCGCTGCT CGAGCATCAT CGCAAGGGCG CGGTGCGCTG GCCGCTGTTT
CGCTGGCTGA GCCTGGGGAT TCTGCTCGGT GCGGCGCTGG GCGCACTGAC CGCGGCGCTG
ATTCAGGGGC CGCTGCTGCA GAAGATCATC GGCACCTTCG CCATCGTCAT CGCCGTGCAG
CTGGCGCTGG ACCTGAAACC CAGGGCCAGT CGCGATGTCC CAGGCAAGCC CGCGCTGGCG
GTGGCCGGTG GGGTAATCGG CTGGGCTTCG GCGATCTTCG GCATCGGCGG CGGTTCGTTG
ACCGTGCCCT TTCTGGTCTG GCGCAGCGTA CCGATGCAGC AGGCGGTGGC CACGTCGGCA
GCCTGTGGTC TGCCGATCGC CATCGCCGGC GCGCTGAGTT TCATGTTCAC CGGCTGGGGG
AATCCGAATC TGCCGCAGTG GAGCGTCGGG TTCATCTATC TCCCGGCATT GCTGGGGATT
GCGCTGACCA GCATGTTCTT TGCCCGTTTC GGCGCGCGTC TGGCCCATCG CCTGTCGCCG
CGTCTGCTCA AGCGTCTGTT CGCCCTGCTG CTGCTGAGCG TGGGCCTGAG TTTTCTGATC
TAA
 
Protein sequence
MELLLYLVLG AAAGVLAGLF GVGGGLIIVP VLVLSFTSQG MPSEILTHLA VGTSLATIVF 
TSINSLLEHH RKGAVRWPLF RWLSLGILLG AALGALTAAL IQGPLLQKII GTFAIVIAVQ
LALDLKPRAS RDVPGKPALA VAGGVIGWAS AIFGIGGGSL TVPFLVWRSV PMQQAVATSA
ACGLPIAIAG ALSFMFTGWG NPNLPQWSVG FIYLPALLGI ALTSMFFARF GARLAHRLSP
RLLKRLFALL LLSVGLSFLI