Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_4215 |
Symbol | |
ID | 5106639 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 4619660 |
End bp | 4620442 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640505479 |
Product | hypothetical protein |
Protein accession | YP_001189694 |
Protein GI | 146309229 |
COG category | [R] General function prediction only |
COG ID | [COG0730] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACTGC TGCTCTACCT GGTGCTGGGT GCGGCCGCCG GTGTGCTGGC TGGCCTGTTC GGCGTGGGTG GCGGGTTGAT CATCGTGCCG GTGCTGGTGC TGAGCTTCAC CTCGCAGGGC ATGCCGAGCG AGATCCTCAC CCACCTGGCG GTAGGCACCT CGCTGGCGAC CATCGTCTTC ACCTCGATCA ATTCGCTGCT CGAGCATCAT CGCAAGGGCG CGGTGCGCTG GCCGCTGTTT CGCTGGCTGA GCCTGGGGAT TCTGCTCGGT GCGGCGCTGG GCGCACTGAC CGCGGCGCTG ATTCAGGGGC CGCTGCTGCA GAAGATCATC GGCACCTTCG CCATCGTCAT CGCCGTGCAG CTGGCGCTGG ACCTGAAACC CAGGGCCAGT CGCGATGTCC CAGGCAAGCC CGCGCTGGCG GTGGCCGGTG GGGTAATCGG CTGGGCTTCG GCGATCTTCG GCATCGGCGG CGGTTCGTTG ACCGTGCCCT TTCTGGTCTG GCGCAGCGTA CCGATGCAGC AGGCGGTGGC CACGTCGGCA GCCTGTGGTC TGCCGATCGC CATCGCCGGC GCGCTGAGTT TCATGTTCAC CGGCTGGGGG AATCCGAATC TGCCGCAGTG GAGCGTCGGG TTCATCTATC TCCCGGCATT GCTGGGGATT GCGCTGACCA GCATGTTCTT TGCCCGTTTC GGCGCGCGTC TGGCCCATCG CCTGTCGCCG CGTCTGCTCA AGCGTCTGTT CGCCCTGCTG CTGCTGAGCG TGGGCCTGAG TTTTCTGATC TAA
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Protein sequence | MELLLYLVLG AAAGVLAGLF GVGGGLIIVP VLVLSFTSQG MPSEILTHLA VGTSLATIVF TSINSLLEHH RKGAVRWPLF RWLSLGILLG AALGALTAAL IQGPLLQKII GTFAIVIAVQ LALDLKPRAS RDVPGKPALA VAGGVIGWAS AIFGIGGGSL TVPFLVWRSV PMQQAVATSA ACGLPIAIAG ALSFMFTGWG NPNLPQWSVG FIYLPALLGI ALTSMFFARF GARLAHRLSP RLLKRLFALL LLSVGLSFLI
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