Gene Pmen_4209 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4209 
Symbol 
ID5106633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4613199 
End bp4613729 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content65% 
IMG OID640505473 
Productdihydrofolate reductase 
Protein accessionYP_001189688 
Protein GI146309223 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0262] Dihydrofolate reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGCGG CCATGAAAAC GACACTGCCC CTTTCCCTGA TCGCCGCCCT CGCCGACAAC 
CGCGTGATCG GTCGCGACAA CCAACTGCCC TGGCACCTGC CGGCGGACCT CAAGCACTTC
AAGGCGCTGA CGCTCGGCAA GCCGATTATC ATGGGGCGCA AGACCTGGGA TTCGCTCGGT
CGGCCGCTGC CGGGGCGGCT CAACATCGTG GTCAGCCGCC AGGCAGGCCT GACTCTGGAA
GGCGCCGAGG TATTCGCGAC GCTGGAAGAG GCCATCAAAC GAGCCGACGC CTGGGCGCGT
GAAGAGGATG CCGAGGAACT GATGCTGATC GGCGGCGCGC AGCTCTATGA GCTGGGCCTG
GAACAGGCCG ATCGCCTGTA TCTGACCCGG GTCGGTCTCG AGCCTGAGGG TGATGCGTTC
TTTCCGCAAA TCGACGAGTC GGCCTGGCGC ATGACCTCCA GCGTCGAGCA TCCGGCCTCC
GCCGAGACGC CCTTCTACGC CTTCGAAGTG TGGGAACGGC GCGGCGCATA A
 
Protein sequence
MLAAMKTTLP LSLIAALADN RVIGRDNQLP WHLPADLKHF KALTLGKPII MGRKTWDSLG 
RPLPGRLNIV VSRQAGLTLE GAEVFATLEE AIKRADAWAR EEDAEELMLI GGAQLYELGL
EQADRLYLTR VGLEPEGDAF FPQIDESAWR MTSSVEHPAS AETPFYAFEV WERRGA