Gene Pmen_4208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4208 
Symbol 
ID5106632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4612446 
End bp4613093 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content65% 
IMG OID640505472 
Producthypothetical protein 
Protein accessionYP_001189687 
Protein GI146309222 
COG category[S] Function unknown 
COG ID[COG1284] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGATC AATCACCCGT CGACGAGCGC CCGAGCGCCG TCGCTGCACT CTTCGTGCGC 
CACCCGCTGT GGGAGGATGC GCTGGCCTTG CTGTTCGGCA CCGCCCTGGT GGCCTTGGGC
ATCGCCTTTT ATACGCATGC CGGCCTGCTC ACCGGCGGCA CCGTCGGCAT TGCCTTTCTG
GCCAACTATC AGGCCGGCTG GTCGTTCGGG CTGGTGTTCT GCCTGGTCAA CCTGCCGTTC
TACCTGCTCG GTATCTGGCG CATGGGCTGG GGCTTCACCC TGCGTACCGG TTGCGCGGTG
CTGCTGGTTT CGCTGCTGGC CGAGGCGACG CCGCACTGGG TCGCCTTCGC TCACCTCAGC
GCGCTTTATG CCGCATTGTT CGGTGGCGCT GCGATGGGCC TGGGGTTGCT CATGTTGTTC
CGCCATCGCG CCAGCCTGGG CGGGGTGAAC ATTCTCGCCC TGTACATGCA GGAACGCTTC
GGCTTTCGTG CGGGTGCGGT GCAGATGGCC ATCGACGCGA GCATCGTCTT GGCGGCCATC
TTCGTGGTGT CGCCAGACAA GGTGCTGCTC TCGGTGCTGG GGGCGGTGAT GCTCAATCTG
GTGCTGGCGA TCAATCACCG GGCCGATCGT TACATCGGCG TCAGTTGA
 
Protein sequence
MTDQSPVDER PSAVAALFVR HPLWEDALAL LFGTALVALG IAFYTHAGLL TGGTVGIAFL 
ANYQAGWSFG LVFCLVNLPF YLLGIWRMGW GFTLRTGCAV LLVSLLAEAT PHWVAFAHLS
ALYAALFGGA AMGLGLLMLF RHRASLGGVN ILALYMQERF GFRAGAVQMA IDASIVLAAI
FVVSPDKVLL SVLGAVMLNL VLAINHRADR YIGVS