Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_4208 |
Symbol | |
ID | 5106632 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 4612446 |
End bp | 4613093 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640505472 |
Product | hypothetical protein |
Protein accession | YP_001189687 |
Protein GI | 146309222 |
COG category | [S] Function unknown |
COG ID | [COG1284] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGATC AATCACCCGT CGACGAGCGC CCGAGCGCCG TCGCTGCACT CTTCGTGCGC CACCCGCTGT GGGAGGATGC GCTGGCCTTG CTGTTCGGCA CCGCCCTGGT GGCCTTGGGC ATCGCCTTTT ATACGCATGC CGGCCTGCTC ACCGGCGGCA CCGTCGGCAT TGCCTTTCTG GCCAACTATC AGGCCGGCTG GTCGTTCGGG CTGGTGTTCT GCCTGGTCAA CCTGCCGTTC TACCTGCTCG GTATCTGGCG CATGGGCTGG GGCTTCACCC TGCGTACCGG TTGCGCGGTG CTGCTGGTTT CGCTGCTGGC CGAGGCGACG CCGCACTGGG TCGCCTTCGC TCACCTCAGC GCGCTTTATG CCGCATTGTT CGGTGGCGCT GCGATGGGCC TGGGGTTGCT CATGTTGTTC CGCCATCGCG CCAGCCTGGG CGGGGTGAAC ATTCTCGCCC TGTACATGCA GGAACGCTTC GGCTTTCGTG CGGGTGCGGT GCAGATGGCC ATCGACGCGA GCATCGTCTT GGCGGCCATC TTCGTGGTGT CGCCAGACAA GGTGCTGCTC TCGGTGCTGG GGGCGGTGAT GCTCAATCTG GTGCTGGCGA TCAATCACCG GGCCGATCGT TACATCGGCG TCAGTTGA
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Protein sequence | MTDQSPVDER PSAVAALFVR HPLWEDALAL LFGTALVALG IAFYTHAGLL TGGTVGIAFL ANYQAGWSFG LVFCLVNLPF YLLGIWRMGW GFTLRTGCAV LLVSLLAEAT PHWVAFAHLS ALYAALFGGA AMGLGLLMLF RHRASLGGVN ILALYMQERF GFRAGAVQMA IDASIVLAAI FVVSPDKVLL SVLGAVMLNL VLAINHRADR YIGVS
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