| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4205 |
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| Symbol | |
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| ID | 5106629 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4609211 |
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| End bp | 4611049 |
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| Gene Length | 1839 bp |
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| Protein Length | 612 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640505469 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_001189684 |
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| Protein GI | 146309219 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGATT ACCGCTCGAA AACCTCCACC CACGGCCGCA ACATGGCCGG CGCCCGTGCC
CTGTGGCGCG CTACCGGGAT GAAGGACGAA GACTTCAAGA AGCCGATCAT CGCCATCGCC
AACTCCTTCA CCCAGTTCGT GCCCGGCCAC GTGCACCTGA AGGACCTCGG CCAGCTGGTG
GCCCGCGAGA TCGAGAAGCA CGGCGGCGTG GCCAAGGAAT TCAACACCAT CGCCGTGGAC
GACGGCATCG CCATGGGCCA CGACGGCATG CTCTATTCGC TGCCGAGCCG CGAGATCATC
GCCGACTCCG TCGAATACAT GGTCAACGCC CACTGCGCCG ACGCCATCGT CTGCATCTCC
AACTGCGACA AGATCACCCC CGGCATGCTG ATGGCCGCCC TGCGCCTGAA CATCCCGGTG
GTGTTCGTCT CCGGCGGGCC GATGGAAGCC GGCAAGACCA AGCTGGCCAA CCACGGCCTG
GATCTGGTCG ACGCCATGGT GGTCGCGGCC GACGACTCCT GCTCCGACGA GAAGGTCGCC
GAATACGAGC GCAGCGCCTG CCCGACCTGC GGCAGCTGCT CCGGCATGTT CACCGCCAAC
TCGATGAACT GCCTGACCGA GGCCCTGGGT CTGTCGCTGC CGGGCAACGG CTCGACCCTG
GCCACCCACG CCGACCGCGA GCAGCTGTTC CTGCGCGCCG GGCGCCTGGT CGTCGAGCTG
TGCCAGCGCT ACTACGGCGA GGGCGACGAG TCGGTGCTGC CGCGCAACGT CGCCAGCTTC
AAGGCGTTCG AGAACGCCAT GACCCTGGAC ATCGCCATGG GCGGTTCCAC CAACACCATC
CTGCACCTGC TGGCCGCCGC TCAGGAGGCC GAGCTGGCCT TCGACCTGCG CGACATCGAT
CGCCTGTCGC GCAAGGTGCC GCAACTGTGC AAGGTGGCGC CGAACATCCA GAAGTACCAC
ATGGAAGACG TGCACCGCGC CGGCGGCATC TTCTCCATCC TCGGCGAGCT GGCCCGTGGC
GGCCTGCTGC ACACCGACGT GCCGACCGTG CACAGCCCGA GCATGGCCGA CGCCATCGCC
CAGTGGGACA TCACCCAGAC CCGCGACGAG AAGGTGCACA CCTTCTTCAA GGCCGGCCCG
GCCGGTATCC CGACCCAGGT CGCCTTCAGC CAGAGCACCC GCTGGGACAC CCTGGACGAT
GACCGCGAGA ACGGCTGCAT CCGCTCGGTC GAGCACGCCT ATTCGCAAGA GGGCGGCCTG
GCGGTGCTGT ACGGCAACAT CGCCCTGGAC GGCTGCGTGG TGAAGACCGC CGGCGTGGAT
GAATCCATCC ACGTCTTCGA AGGCACGGCG AAGATCTTCG AAAGCCAGGA CAGCGCGGTC
AAAGGCATCC TCGCCGATGA AGTGAAGGCC GGCGACATCG TCATCATCCG CTACGAAGGC
CCGAAAGGCG GCCCGGGCAT GCAGGAAATG CTCTATCCGA CCAGCTACCT GAAGTCCAAG
GGCCTGGGCA AGGTCTGCGC CCTGCTCACC GACGGCCGCT TCTCCGGCGG CACTTCGGGC
CTGTCCATCG GCCATGCCTC GCCGGAAGCC GCCGCCGGCG GCGCCATCGG CCTGGTCAAG
GACGGCGACA AGGTGCTGAT CGACATCCCC AACCGCAGCA TCAACCTGCT GGTGTCGGAT
GAAGAGCTGG CCGTGCGCCG CGCCGAGCAG GACAAGAAGG GCTGGAAGCC GGTGCAGCCG
CGCGCGCGCA AGGTCTCGAC CGCGCTCAAG GCCTACGCCC TGCTCGCCAC CAGCGCCGAC
AAGGGCGCGG TACGCGACAA GGCGATGCTG GACGGCTGA
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| Protein sequence | MPDYRSKTST HGRNMAGARA LWRATGMKDE DFKKPIIAIA NSFTQFVPGH VHLKDLGQLV
AREIEKHGGV AKEFNTIAVD DGIAMGHDGM LYSLPSREII ADSVEYMVNA HCADAIVCIS
NCDKITPGML MAALRLNIPV VFVSGGPMEA GKTKLANHGL DLVDAMVVAA DDSCSDEKVA
EYERSACPTC GSCSGMFTAN SMNCLTEALG LSLPGNGSTL ATHADREQLF LRAGRLVVEL
CQRYYGEGDE SVLPRNVASF KAFENAMTLD IAMGGSTNTI LHLLAAAQEA ELAFDLRDID
RLSRKVPQLC KVAPNIQKYH MEDVHRAGGI FSILGELARG GLLHTDVPTV HSPSMADAIA
QWDITQTRDE KVHTFFKAGP AGIPTQVAFS QSTRWDTLDD DRENGCIRSV EHAYSQEGGL
AVLYGNIALD GCVVKTAGVD ESIHVFEGTA KIFESQDSAV KGILADEVKA GDIVIIRYEG
PKGGPGMQEM LYPTSYLKSK GLGKVCALLT DGRFSGGTSG LSIGHASPEA AAGGAIGLVK
DGDKVLIDIP NRSINLLVSD EELAVRRAEQ DKKGWKPVQP RARKVSTALK AYALLATSAD
KGAVRDKAML DG
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