| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4197 |
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| Symbol | |
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| ID | 5106621 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4599927 |
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| End bp | 4600739 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640505461 |
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| Product | formamidopyrimidine-DNA glycosylase |
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| Protein accession | YP_001189676 |
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| Protein GI | 146309211 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
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| TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGAAC TACCTGAAGT CGAAACCACC CGTCGCGGTA TCGCCCCCTA TCTCGAAGGG
CAGCGCGTCA GCCGCGTGAT CGTGCGCGAG CGCCGCCTGC GCTGGCCGAT TCCCGAGGAC
CTGGACGTGC GTTTGTCCGG CCAACGCATC GAGTGCGTCG AACGGCGCGC CAAGTACCTG
CTGATCAAGG CCGAGGCCGG TAGCCTGATC GGCCATCTGG GCATGTCCGG CAGCTTGCGC
CTGGTCGAGT GCGGCCTGGT CGCGGCCAAG CACGAGCATG TGGATATCGA GCTGGAGTCC
GGCCTGGCCC TGCGCTACAC CGACCCGCGC CGTTTCGGCG CGCTGCTGTG GTGCGAGGAC
CCGCTGCGTC ACGAACTGCT CGCCCGGCTC GGGCCCGAAC CCCTGGGCGG CCTGTTCGAT
GGCGAGCGGC TGTTCCAGCT CTCGCGCGGC CGCAGCATGG CGGTCAAGCC CTTCATCATG
GACAACGCAG TGGTGGTGGG GGTGGGCAAT ATCTATGCGA CCGAGGCGTT GTTCGCCGCC
GGCATCGATC CGCGCCGCGA AGCCGGGTCG ATCTCGCGGG CGCGCTACCT GCGCCTGGCC
GAGGAGATCA AGCGCATCCT CGCCCATGCC ATCGAGCGTG GCGGCACCAC GCTGCGCGAC
TTCGTCGGCG GCGATGGCCA GCCCGGCTAC TTCCAGCAGG AGCTGTTCGC CTACGGCCGC
GCTGGCGAGT TCTGCAAGGT CTGCGGCACT ACGCTGCGTG AGGTCAAGCT GGGCCAGCGG
GCGAGTGTCT ACTGTCCCAG GTGTCAACGT TGA
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| Protein sequence | MPELPEVETT RRGIAPYLEG QRVSRVIVRE RRLRWPIPED LDVRLSGQRI ECVERRAKYL
LIKAEAGSLI GHLGMSGSLR LVECGLVAAK HEHVDIELES GLALRYTDPR RFGALLWCED
PLRHELLARL GPEPLGGLFD GERLFQLSRG RSMAVKPFIM DNAVVVGVGN IYATEALFAA
GIDPRREAGS ISRARYLRLA EEIKRILAHA IERGGTTLRD FVGGDGQPGY FQQELFAYGR
AGEFCKVCGT TLREVKLGQR ASVYCPRCQR
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