| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4186 |
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| Symbol | |
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| ID | 5106610 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4589145 |
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| End bp | 4589882 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640505450 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001189665 |
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| Protein GI | 146309200 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGGATG CATCGGGGGG TAACACTTCG GCTGTTTCGC CTGTACCTTT GCCACTTCTG
AAGTCGAGAT CGAGCTGCGT CATGGCGCCA CCCAAGACCC GCGACCGCAT CGTTGCCGAG
AGCCTGGCCC TGTTCAACGG CCAGGGCGAG CGCAACGTCA CCACCAACCA CATCGCCGCG
CACCTGGGCA TTTCGCCGGG CAATCTGTAT TACCACTTCC GCAACAAGCA GATGATCATC
GCCGAGCTGT TCGCCCAGTA CGAAGCGCAG GTCGACAGCT TTCTGCGCCT GCCCGAAGGC
CGCGCGCTGA CGGTGGAGGA CAAGACCTTC TATCTGGAGG CGCTGCTGGC GGCGATGTGG
CACTACCGCT TCCTGCACCG CGACCTGGAG CACCTGCTGG AATCCGACGC CGAGCTGGCC
GAGCGTTACC GCGCCTTTGC CCAGCGCTGC CTGGTGGGGG CGCAGTCGAT CTACCAGGGC
TTCGTCGAGG CCGGCATCCT GTTGATGACG CCGGCGCAGA TCGAGGCGCT GACGCTCAAC
GCCTGGATCA TCATGACCTC CTGGGTGCGC TTTCTCTGCA CGGCGGGCGC CAGCCCGGAC
AACCTCAGCC AGGACATGCT ACGCCGCGGC ATCTACCAGG TGCTGGCGCT GGAGGGCGGC
TATATCGCGC CTTCGGCGCG CGCGGCGGTC GAGGCGCTTT ACGATCGCCT GCACGTGCCG
CTGGAGCAGG TGCTCTGA
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| Protein sequence | MADASGGNTS AVSPVPLPLL KSRSSCVMAP PKTRDRIVAE SLALFNGQGE RNVTTNHIAA
HLGISPGNLY YHFRNKQMII AELFAQYEAQ VDSFLRLPEG RALTVEDKTF YLEALLAAMW
HYRFLHRDLE HLLESDAELA ERYRAFAQRC LVGAQSIYQG FVEAGILLMT PAQIEALTLN
AWIIMTSWVR FLCTAGASPD NLSQDMLRRG IYQVLALEGG YIAPSARAAV EALYDRLHVP
LEQVL
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