| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4184 |
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| Symbol | |
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| ID | 5106608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4586306 |
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| End bp | 4588657 |
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| Gene Length | 2352 bp |
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| Protein Length | 783 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640505448 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_001189663 |
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| Protein GI | 146309198 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGGCC TGGTCACGCG CTGGACCGAC CGCCCGCTGC GCAGCAAGAG CCTGGTGATC
ATCGCCCTGC CGCTGTCGGT GCTGCTGATC TCCCTGGTGC TGGTGTACAT CACCGAACGC
CAGACCTCGC GGGTCGAAGA CGACGTGCGC CGGGCACTGC GCGTGCAGGG CGACGTGCAG
GCGGTACACA GCCTGCTGGC CGAGGCGGCG GCCAGCGTGC GCGGCTACCT GCTGGTCCAG
CGCAGCGACT TCCTGCCGTC CTACCGCAGT GCGCTGGAGC GCATCGACAG TACGCTGCGG
CGCCTGGACA ACGACATTCG CGACCCGCAG ATGCGCGGCA GCCTGGAACG CCTGCGCCCG
CTGATCGTGA TCAAGCTGGA AGGCCTGGAA CAGCTCAAGG CGCTGGCCAG CAGCGACGAC
CGCGCGGCGA TGACGCGCAT CCTGGTGGAC AACAAGCATG TGCTCGATGC GCTGCGCCAG
GAGATTCAGC AGATGCTCGA GCGTGAGCAG ACCCTGCTCG ACGAGCGCAA CGCCGAAGCC
AGCGCGGTGC GCTCGCGCAT GCTCCTGGCC ACCGGCCTGG CCGCCATGTT CGGCGTGCTC
GGTGCACTGT TCGCCGTGGT GCTGCTGTCC ACCGGCATCG TCCATCGGGT GCAGCAGGTC
GAGCGCAACG CGCGGCGCCT GGCTCTGGGT CAGCCGCTGA TCCCCCAAGG CCCGGCGGCC
GACGAGATCG GCCAGCTCGC CGCCAGCCTG GAAGAGGCCG GGCAGCTGCT GGCCGAACGC
GAGCGCGCCC TGCGCGACAA CGAGGAGCGC CTGCGCCTGA TCATCGACGG GGTCAAGGAA
TACGGCATCT TCGGCCTCGA CCCCAGCGGC CACGTCACCT CCTGGAACAC CGGCGCCGAG
CGCATCAAGG GCTACAGCGA GGCGGACATC CTCGGCCGCC ACTTCTCCCT GTTCTACCCG
CCGCAGGCCC GCGACACCGC CCCTTACCTG GCCCTGCAGG CGGCCACCCG CGAAGGGCGC
TACGAGGAAG AGGCCTGGCG TCAGCGCCGC GATGGCTCGC TGTTCTGGGC CAACGTGGTG
ATCACCGCGC AGCGTGACGC CAGCGGCACC TTGCGCGGCT TCTCCAAGAT CACCCGCGAC
ATCACCGACC GGCGCAATGC CGAGGCCGCC CTGCGCACGG CGCGCGAAGA GGCGGAGAAC
GCCAGCCGGG CGAAAAGCGA ATTTCTCTCG CGCATGAGCC ACGAGCTGCG CACGCCGCTC
AATTCCATTC TCGGCTTCGC CCAGTTGCTG GAAATGGACC GCGGCACACC GGCGCAGCAG
GCCCAGGTGC GTCATATCCT GCGCGCCGGG CGGCACCTGC TGGGGCTGAT CAACGAGGTG
CTGGACATTG CCCGCATCGA ATCCGGGCGG CTGGCGCTGA GCCCCGAGCC GTTGCCGTTG
CGCCCGCTGC TACAGGAGGT CAGCCTGCTG CTGTCGCCCC AGGCCGACAG CGCCGATATC
CGCCTGCGCC TGCCGGAGGA GCTGCCCGCC GAACTCTGCG TGCAGGCCGA CCGCCAGCGC
CTGGTGCAGG TGCTGCTCAA CCTGCTGTCC AATGCGATCA AGTACAACCA CCCTGGCGGC
CATGTCGAAG TGCGGGTGCA GGCCGACAGC GACACCGTCA CGCTGAGCGT GATCGACAAC
GGCCCGGGCA TCGCCGCCGA GGATCTGGAG CGCCTGTTCA TCCCCTTCGA GCGCCTCGGC
GCCGCAGCCA GCGAGGTGGA GGGCACCGGC CTGGGCCTGG CCCTGAGCAA GAGCCTGCTG
GAGCAGATGG ATGGCAGCCT CGGCGTGCAC AGCACGCCCG GCGAGGGCAG CACCTTCAGC
CTGACGCTGC CACGGGCGCA GGTGCATGAC GGCCTGCTGC CGGCGCCGGC CGCGGCACCA
CCGCCCGCGG CCAGCGACAT CGCCCCGCCG GAGCGGCCGC TGCGCGTGCT GTGCATTGAA
GACAACCTGT CCAGCCTGGC GCTGATCGAG ACCCTGCTGG CGCGCTGGCC GCAGGTGCAG
GTGATTTCGG CCATGCAGGG CCAGCTCGGT ATCGACCTGG CCTGGCAGCA CCGCCCCGAG
GTGATTCTGC TGGATCTCGA CCTGCCCGAC CTCTCGGGCC AGGAAGTGCT CAAGCGCCTG
CGTCTGAACC CCAGCAGCAG CGATACACCC GTGCTGCTGA TCACCGCCGA CGTCAGCGCC
GGCACCCGGC GCGACCTGCA GCAGGCTGGC GCCACCGCGG TGCTGAGCAA ACCCCTGCAC
GTGCCGACCT TTCTCGCCGC CCTTCGCCAG CATCTGGATG CCGCCACGCC CACCCCGCCT
CTCGGAGCCT GA
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| Protein sequence | MKGLVTRWTD RPLRSKSLVI IALPLSVLLI SLVLVYITER QTSRVEDDVR RALRVQGDVQ
AVHSLLAEAA ASVRGYLLVQ RSDFLPSYRS ALERIDSTLR RLDNDIRDPQ MRGSLERLRP
LIVIKLEGLE QLKALASSDD RAAMTRILVD NKHVLDALRQ EIQQMLEREQ TLLDERNAEA
SAVRSRMLLA TGLAAMFGVL GALFAVVLLS TGIVHRVQQV ERNARRLALG QPLIPQGPAA
DEIGQLAASL EEAGQLLAER ERALRDNEER LRLIIDGVKE YGIFGLDPSG HVTSWNTGAE
RIKGYSEADI LGRHFSLFYP PQARDTAPYL ALQAATREGR YEEEAWRQRR DGSLFWANVV
ITAQRDASGT LRGFSKITRD ITDRRNAEAA LRTAREEAEN ASRAKSEFLS RMSHELRTPL
NSILGFAQLL EMDRGTPAQQ AQVRHILRAG RHLLGLINEV LDIARIESGR LALSPEPLPL
RPLLQEVSLL LSPQADSADI RLRLPEELPA ELCVQADRQR LVQVLLNLLS NAIKYNHPGG
HVEVRVQADS DTVTLSVIDN GPGIAAEDLE RLFIPFERLG AAASEVEGTG LGLALSKSLL
EQMDGSLGVH STPGEGSTFS LTLPRAQVHD GLLPAPAAAP PPAASDIAPP ERPLRVLCIE
DNLSSLALIE TLLARWPQVQ VISAMQGQLG IDLAWQHRPE VILLDLDLPD LSGQEVLKRL
RLNPSSSDTP VLLITADVSA GTRRDLQQAG ATAVLSKPLH VPTFLAALRQ HLDAATPTPP
LGA
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