Gene Pmen_4169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4169 
Symbol 
ID5105688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4572814 
End bp4573185 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content67% 
IMG OID640505433 
Producthypothetical protein 
Protein accessionYP_001189648 
Protein GI146309183 
COG category[S] Function unknown 
COG ID[COG2363] Uncharacterized small membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.338071 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCGTC TGTGGCTGCT GCTGTCCGCC TTCGCCGGGT TTACCGGCGT CGCCCTCGGT 
GCCTTTGCCG CCCATGGTCT GAAGCATCGG CTGACGCCCG AGTACCTGGC GGTGTTCCAG
ACCGGCACGC ATTACCAGCT GATCCACGCG CTGGCCCTGT TCGGCGTCGG CCTGCTGGCA
CTGCACGCGC CGGGGCGGCT GGTCAATCTG GCCGGTGGCG CCTTCGCTAT GGGCATCGTG
CTGTTTTCCG GCAGCCTCTA CCTGCTGACT CTCAGCGGTG TTGGCAAGCT GGGCATGATC
ACCCCGTTCG GCGGTGTTGC CTTCCTGATC GGCTGGCTGT GCCTGGGCCT GGCGGCCTGG
AAGCTGGCCT AG
 
Protein sequence
MARLWLLLSA FAGFTGVALG AFAAHGLKHR LTPEYLAVFQ TGTHYQLIHA LALFGVGLLA 
LHAPGRLVNL AGGAFAMGIV LFSGSLYLLT LSGVGKLGMI TPFGGVAFLI GWLCLGLAAW
KLA