Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_4168 |
Symbol | |
ID | 5105687 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 4572443 |
End bp | 4572643 |
Gene Length | 201 bp |
Protein Length | 66 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640505432 |
Product | thiamine biosynthesis protein ThiS |
Protein accession | YP_001189647 |
Protein GI | 146309182 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2104] Sulfur transfer protein involved in thiamine biosynthesis |
TIGRFAM ID | [TIGR01683] thiamine biosynthesis protein ThiS |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.852753 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCATTC AATTGAATGG AGAACCCTTC GAGCTGCCCG ACAACCAGAG CGTCGCGGAC CTGCTGGCCC GTCTCGATCT GACCGGGCGC CGCGTGGCGG TCGAGCTCAA TCTGGACATC GTTCCACGCA GCCAGCACGA CAGCACCCGT CTCGCCGAGG GCGATCAGGT GGAAGTGGTG CACGCCATCG GCGGCGGTTG A
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Protein sequence | MRIQLNGEPF ELPDNQSVAD LLARLDLTGR RVAVELNLDI VPRSQHDSTR LAEGDQVEVV HAIGGG
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