Gene Pmen_4168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4168 
Symbol 
ID5105687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4572443 
End bp4572643 
Gene Length201 bp 
Protein Length66 aa 
Translation table11 
GC content65% 
IMG OID640505432 
Productthiamine biosynthesis protein ThiS 
Protein accessionYP_001189647 
Protein GI146309182 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2104] Sulfur transfer protein involved in thiamine biosynthesis 
TIGRFAM ID[TIGR01683] thiamine biosynthesis protein ThiS 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.852753 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATTC AATTGAATGG AGAACCCTTC GAGCTGCCCG ACAACCAGAG CGTCGCGGAC 
CTGCTGGCCC GTCTCGATCT GACCGGGCGC CGCGTGGCGG TCGAGCTCAA TCTGGACATC
GTTCCACGCA GCCAGCACGA CAGCACCCGT CTCGCCGAGG GCGATCAGGT GGAAGTGGTG
CACGCCATCG GCGGCGGTTG A
 
Protein sequence
MRIQLNGEPF ELPDNQSVAD LLARLDLTGR RVAVELNLDI VPRSQHDSTR LAEGDQVEVV 
HAIGGG