Gene Pmen_4152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4152 
Symbol 
ID5105671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4555553 
End bp4556146 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content63% 
IMG OID640505416 
Productprotein of unknown function YGGT 
Protein accessionYP_001189631 
Protein GI146309166 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.762639 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGGCC TCATCGAAGC CCTGATCTAC ATCATCCAGA CCCTCGGCAG CCTGTACCTG 
CTGATCGTGC TGCTGCGCTT CATCCTGCAA CTGGTGCGCG CGGACTTCTA CAACCCGCTG
AGCCAGTTCA TCGTCAAGGC CACGCAGCCA CTGCTGACGC CGCTGCGCCG CATCATTCCT
GGCTTCGCCG GGCTGGACCT GGCCTCGCTG GTGCTAGCCA TCCTGGTGCA GCTGCTGCTG
ATGGTGGTGA CCCTGACCCT GATGGGCTAC AACGTCGGCG GCTTCATCCT GCAGCTGCTG
GTGTGGTCGG TGATCGGCGT GACCTCGCTG TTTCTCAAGG TGTTCTTCTT CGCCCTGATC
ATCAGCGTGA TCCTGTCGTG GGTCGCTCCG GGCAGCTACA ACCCGGGCGC GCAGCTGGTC
AACCAGATCT GCGAACCGCT GCTGGCGCCG TTCCGCAAGC TGCTGCCGAA CCTGGGCGGC
CTGGATATCT CGCCGATCTT CGCCTTCATC ACCATCAATC TGATCGACCG CTTCGTCATC
GGCAGCCTGG CCGCCTCCAC CGGCCTGCCG CCGATGCTCA GCCCCTTCCT TTGA
 
Protein sequence
MSGLIEALIY IIQTLGSLYL LIVLLRFILQ LVRADFYNPL SQFIVKATQP LLTPLRRIIP 
GFAGLDLASL VLAILVQLLL MVVTLTLMGY NVGGFILQLL VWSVIGVTSL FLKVFFFALI
ISVILSWVAP GSYNPGAQLV NQICEPLLAP FRKLLPNLGG LDISPIFAFI TINLIDRFVI
GSLAASTGLP PMLSPFL