| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4150 |
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| Symbol | |
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| ID | 5105669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4554012 |
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| End bp | 4554704 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640505414 |
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| Product | alanine racemase domain-containing protein |
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| Protein accession | YP_001189629 |
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| Protein GI | 146309164 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
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| TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 0.766912 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACGA TAGCAGAGAA TATTGCAAAG GTCGGAGCGC GCATCCGTGA GGCGGCGCAA
GCCTCGCAGC GCAATTTTGC CGATATCGGC CTGCTGGCGG TGAGCAAGAC CAAACCGGCC
GACGCCATTC GTGAGGCCCA TGCCGCCGGC CTGCGCGATT TCGGCGAGAA CTACCTGCAG
GAGGCGCTGG AAAAGCAGGC CGCGCTGAGC GACCTGCCCT TGATCTGGCA CTTCATCGGC
CCCATTCAGT CGAACAAGAC CCGGCCCATC GCCGAGCACT TCGACTGGGT GCACTCCGTG
GATCGCCTGA AAATCGCCCA ACGCCTGTCC GACCAGCGCC CTGCGCACCT GGCGCCGCTG
AATATCTGCC TGCAGGTCAA CGTCAGCGGT GAGGACAGCA AATCCGGCTG CAGCCCCGAG
GAACTGCCGG AGCTGGCCCA GGCCATTGCT GCCTTGCCCA ACCTCAAGCT GCGCGGGCTG
ATGGCGATCC CCGAACCCAC CGACGACATC GCCGCGCAAC ACGCCGCTTT CGCTCGCCTG
CGCCAGTTGC GCGATGATCT CGGTCTGCAA CTCGACACCC TGTCCATGGG CATGAGCCAT
GACCTGGAGG CCGCCATCGC CGAAGGCGCC ACTTGGGTGC GCATCGGCAC CGCCCTGTTC
GGCGCCCGCG ACTACGGCCA GCCCTCCCAT TGA
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| Protein sequence | MSTIAENIAK VGARIREAAQ ASQRNFADIG LLAVSKTKPA DAIREAHAAG LRDFGENYLQ
EALEKQAALS DLPLIWHFIG PIQSNKTRPI AEHFDWVHSV DRLKIAQRLS DQRPAHLAPL
NICLQVNVSG EDSKSGCSPE ELPELAQAIA ALPNLKLRGL MAIPEPTDDI AAQHAAFARL
RQLRDDLGLQ LDTLSMGMSH DLEAAIAEGA TWVRIGTALF GARDYGQPSH
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