| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4143 |
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| Symbol | |
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| ID | 5105662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4546416 |
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| End bp | 4547504 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640505407 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_001189622 |
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| Protein GI | 146309157 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATCA ACGACGCGCT GCACCGCCTG CTACTCGACA ACCTGACCAC CGCCACCCTG
CTGCTCGACA GCCAGCTGTG CCTCGAGTAC ATGAACCCGG CGGCGGAAAT GCTCCTGGCC
GTCAGCGGCC AGCGCAGCCA CGGTCAGTTC ATCAGCGACC TGTTCACCGA ATCGCCCGAA
GCGCTGTCAT CCTTGCGCCA GGCGGTGGAG CAGGCGCATC CGTTCAACAA GCGTGAAGCC
GTGCTGACCT CGGTCACCGG CCAGACGCTG ACCGTGGACT ACGCGGTGAC GCCGCTGTTC
AGCAAGGGCG AGACCCTGCT GCTGCTGGAA GTGCACCCGC GCGACCGCCT GCTGCGCATC
ACCAAGGAAG AGGCGCAGCT GTCCAAGCAG GAAACCACCA AACTGCTGGT GCGCGGCCTG
GCCCACGAGA TCAAGAACCC GCTCGGCGGG ATTCGTGGCG CCGCCCAGCT GCTGTCGCGC
GAACTGCCCA ATGAAGAGCT CAAGGACTAC ACCAACGTCA TCATCGAGGA GGCCGACCGC
CTGAGAAATC TGGTCGACCG CATGCTCGGT TCGAACAAGC TGCCGTCGCT GGCGATGACC
AACGTGCACG AGGTGCTCGA GCGCGTCGCC AACCTGATCG AGGCGGAAAG CCAGGGCGGC
ATCACGTTGG TGCGCGACTA TGACCCGAGC ATCCCGGACC TGCTGATCGA CCGTGAGCAG
ATGATCCAGG CCGTACTCAA CATCGTGCGC AACGCCATGC AGGCCATCGC CGGGCAGAAG
CACGACATGG GCCTGGGTCG CATCAGCCTG CGCACCCGTA CCCTGCGCCA GTTCACCATC
GGCCACACGC GCCACCGCCT GGTGGTCAAG GTCGAGATCA TCGACAACGG CCCCGGCATT
CCGCCGGAGC TGCAGGAAAC CATCTTCTAT CCCATGGTCA GCGGGCGTGC CGACGGCACC
GGCCTGGGCC TGGCGATTAC CCAGAACATC ATCAGTCAGC ACCAGGGCCT GATCGAGTGC
GAGAGCCACC CCGGCCACAC CGTGTTCTCG ATCTTCCTGC CACTGGAACA AGGAGCGACC
ACGCCATGA
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| Protein sequence | MTINDALHRL LLDNLTTATL LLDSQLCLEY MNPAAEMLLA VSGQRSHGQF ISDLFTESPE
ALSSLRQAVE QAHPFNKREA VLTSVTGQTL TVDYAVTPLF SKGETLLLLE VHPRDRLLRI
TKEEAQLSKQ ETTKLLVRGL AHEIKNPLGG IRGAAQLLSR ELPNEELKDY TNVIIEEADR
LRNLVDRMLG SNKLPSLAMT NVHEVLERVA NLIEAESQGG ITLVRDYDPS IPDLLIDREQ
MIQAVLNIVR NAMQAIAGQK HDMGLGRISL RTRTLRQFTI GHTRHRLVVK VEIIDNGPGI
PPELQETIFY PMVSGRADGT GLGLAITQNI ISQHQGLIEC ESHPGHTVFS IFLPLEQGAT
TP
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