Gene Pmen_4142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4142 
Symbol 
ID5105661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4545532 
End bp4546152 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content65% 
IMG OID640505406 
Producthypothetical protein 
Protein accessionYP_001189621 
Protein GI146309156 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCTGC CGTTAGTCCT CCTTCTGCTC ATCGCGCCGG CCGCATTGGC CCAGGTCTAC 
ACCTATATAG ATGCCGAGGG TAACCGCGTC TTTACCGATA AGCCGCGCAG CGGCAACGCC
GAACGGGTGA TCCTGCCGCC ATCCAACAGC GTGCAGCTGA ACCAGGCGAC GCCCACGGTC
AAACTGGCGC CGACGCAGCA GCCGGTGACC AAGGCCACCG TGCACTACCA GCTGCTACGC
GTCCTGCTGC CCGAGCCGGA CGCCTCGATC CACAATGGCT CGGGCGACAT GATCGTCACC
CTGACCAGCG AGCCCGCCCT GCTGCCGGGG CACAGCTACC GTCTGCTGCT GGACGGCGAA
GTGCAGGGCG AGGCGAGCCG CAGCCCGGTG TTCTCCCTGC GCCATGTCGA CCGTGGCACG
CACCAATTGG TGGCCGAGAT CATCGACGCC GCCGGCCTGA TCGTCGAGCG CACCCCGGCG
CAGCCCTTCC ACATGCATCG CATGACGCTG GCGCAAAAGC GCAAGGTCAA CCCCTGCAAG
AAAGACGACT ACGGCGTTCG TCCCGAATGC CCCCTAAAAG ACAAGCCCAA GGAAGAGGTC
AGCATCCTGC CCTTCTTCTG A
 
Protein sequence
MRLPLVLLLL IAPAALAQVY TYIDAEGNRV FTDKPRSGNA ERVILPPSNS VQLNQATPTV 
KLAPTQQPVT KATVHYQLLR VLLPEPDASI HNGSGDMIVT LTSEPALLPG HSYRLLLDGE
VQGEASRSPV FSLRHVDRGT HQLVAEIIDA AGLIVERTPA QPFHMHRMTL AQKRKVNPCK
KDDYGVRPEC PLKDKPKEEV SILPFF