Gene Pmen_4140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4140 
Symbol 
ID5105659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4543291 
End bp4544697 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content61% 
IMG OID640505404 
ProductL-glutamine synthetase 
Protein accessionYP_001189619 
Protein GI146309154 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0174] Glutamine synthetase 
TIGRFAM ID[TIGR00653] glutamine synthetase, type I 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAAGG CTGTTCAACT GATCAAAGAA CACGACGTGA AGTGGGTAGA CCTGCGCTTC 
ACCGATACCA AGGGCAAGCA GCACCACGTG ACCATGCCGG CCCGTGACGC CCTGGACGAA
GACTTCTTCG AGCACGGCAA GATGTTCGAC GGCTCGTCCA TCCATGGCTG GAAAGGCATC
GAAGCCTCCG ACATGATCCT GATGCCGGTG GACGATACCG CCGTACTGGA CCCGTTCACC
GAAGAGCCGA CCCTGATCCT TGTCTGCGAC ATCATCGAGC CGAGCACCAT GCAAGGCTAC
GATCGCGACC CGCGCTCCAT CGCCAAGCGC GCCGAAGAGT TCCTCAAGAC CACCGGCATC
GGCGACACCG TATTTGTTGG TCCGGAGCCC GAGTTCTTCA TCTTCGACGA AGTGAAGTTC
AAGTCCGACA TCTCCGGCTC GATGTTCAAG ATCTACTCCG AGCAAGGCTC CTGGATGACC
GACGGCGACG TCGAAGGTGG CAACAAGGGC CACCGTCCGG CCGTCAAGGG CGGTTACTTC
CCGGTTCCGC CGTGCGACCA CGACCACGAA ATCCGTACCG CCATGTGCAA CGCCATGGAA
GAAATGGGCC TGGTCGTCGA AGTGCACCAC CACGAAGTGG CCACTGCCGG TCAGAACGAA
ATCGGCGTGA AGTTCAACAC CCTGGTGGCC AAGGCTGACG AAGTTCAGAC CCTGAAGTAC
TGCGTGCACA ACGTCGCCGA CGCCTACGGC AAGACCGCGA CCTTCATGCC GAAGCCGCTG
TACGGCGACA ACGGCTCGGG CATGCACGTG CACATGTCGA TCTCCAAGGA CGGCAAGAAC
ACCTTCGCCG GCGAAGGCTA TGCCGGTCTG TCCGAGACCG CCCTGTACTT CATCGGCGGC
ATCATCAAGC ACGGTAAGGC CCTGAACGGC TTCACCAACC CGTCGACCAA CTCCTACAAG
CGTCTGGTTC CGGGCTTCGA AGCACCGGTG ATGCTGGCCT ACTCGGCTCG CAACCGTTCC
GCCTCGATCC GTATCCCCTA CGTTGCCAGC CCGAAAGCCC GCCGTATCGA AGCGCGCTTC
CCGGACCCGG CTGCCAACCC CTACCTGGCC TTCGCTGCCC TGCTGATGGC CGGTATCGAC
GGTATCCAGA ACAAGATCCA CCCGGGCGAT GCAGCCGACA AGAACCTGTA CGACCTGCCG
CCGGAAGAAG GCAAGCTGAT CCCGCAGGTG TGCGGCAGCC TGAAGGAAGC CCTGGAAGAG
CTGGACAAGG GCCGCGCGTT CCTGACCAAG GGCGGCGTGT TCTCCGACGA CTTCATCGAT
GCCTACATCG AGCTGAAGAG CGAAGAAGAA ATCAAGGTGC GCACCTTCGT GCACCCGCTG
GAATACGACC TGTACTACAG CGTCTAA
 
Protein sequence
MSKAVQLIKE HDVKWVDLRF TDTKGKQHHV TMPARDALDE DFFEHGKMFD GSSIHGWKGI 
EASDMILMPV DDTAVLDPFT EEPTLILVCD IIEPSTMQGY DRDPRSIAKR AEEFLKTTGI
GDTVFVGPEP EFFIFDEVKF KSDISGSMFK IYSEQGSWMT DGDVEGGNKG HRPAVKGGYF
PVPPCDHDHE IRTAMCNAME EMGLVVEVHH HEVATAGQNE IGVKFNTLVA KADEVQTLKY
CVHNVADAYG KTATFMPKPL YGDNGSGMHV HMSISKDGKN TFAGEGYAGL SETALYFIGG
IIKHGKALNG FTNPSTNSYK RLVPGFEAPV MLAYSARNRS ASIRIPYVAS PKARRIEARF
PDPAANPYLA FAALLMAGID GIQNKIHPGD AADKNLYDLP PEEGKLIPQV CGSLKEALEE
LDKGRAFLTK GGVFSDDFID AYIELKSEEE IKVRTFVHPL EYDLYYSV