| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4137 |
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| Symbol | |
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| ID | 5105656 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4538042 |
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| End bp | 4539334 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640505401 |
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| Product | Rieske (2Fe-2S) domain-containing protein |
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| Protein accession | YP_001189616 |
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| Protein GI | 146309151 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTGCA CCCATACCCT GAGCCTGGGC GACCCGCTGG AGCCCGCACG CAAGGCCACC
GCCCGCATGC TGCACGAGCG CGAACGCACC TTCTCGCTGC CACAGCCCTT CTACAACGAC
GAGCGCCTGT TCCAGATCGA CATGCAGGAG ATCTTCCACA AGGAATGGCT GATCGCCGGC
ATGACCTGCG AGATCCCGAC CAAGGGCAAC TTCATCACCC TGCAGCTGGG CGACAACCCG
ATCCTCGTCG TCCGCGGCGC CGAGGGACAG ATCCACGCCT TCCACAACGT CTGCCGTCAC
CGCGGCTCGC GTCTGTGCGT GAGCGACAAG GGCAAGGTGG CCAAGCTGGT CTGCCCCTAC
CACCAGTGGA CCTACGAGCT GGACGGCCGC CTGCTGTTCG CCGGCACCGA GATGGGCGCG
GACTTCAAGC TCAGCGACTA CAACCTCAAG CCGGTTCACT GCAAGAGCGC CGGCGGTTTC
ATCTTCATCA GCCTGGCGGA GAACCCGCCG GCGATCGACG AATTTCTCGC CGGCCTGGCT
CACTACATGG AGCCGTACGA CATGGAGAAC ACCAAGGTCG CGGTGCAGAG CGTGATGCCG
GAGAAGGCCA ACTGGAAGCT GGTGATCGAG AACAACCGCG AGTGCTACCA CTGCAACGGT
TCGCACCCGG AGCTGCTCAA CACCCTGCTG GAGTGGGACG ACACCAACGA CCCGCGCGCA
ACCCAGGAAT TCAAGGATCA CGTCGCCGAA TGCGCCGCCG CCTGGGACGC GGAGAAGATT
CCTTACGTCC ATGCCGGTTT CGGCCTGCGT AACCGCATCG TGCGCATGCC GCTGCTCAAG
GGCACCGTGT CCATGACCAT GGACGGCAAG CCGGGCTGCA AGAAGCTGAT GGGGCGCATC
CAGAACCCGG ACCTGGGCTC CATGCGCATC CTCCACCTGC CGCACTCGTG GAACCACTGC
ATGGGTGACC ACCTGATCAA CTTCACCGTG TGGCCGATCA GCGCCCAGGA GACGGTGGTG
ATCACCAAGT GGCTGGTGCA CAAGGACGCG GTGGAAGGCG TCGATTACGA CGTCGAGCGC
CTGCGCCAGG TGTGGGACGC CACCAACGAC CAGGACCGTC GCCTCGGCGA GGAAAACCAG
CGCGGCATCA ACTCCACCGC CTACCAGCCC GGCCCGTACT CCAAGACCTA CGAGTTCGGC
GTGGTCAACT TCCTCGACTG GTACAGCGAG CGCATGCTCA ACAACCTCGG CGACACCCCG
GCGCAGTCGC TGCGCCAGGC CTCGGGCGAG TGA
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| Protein sequence | MDCTHTLSLG DPLEPARKAT ARMLHERERT FSLPQPFYND ERLFQIDMQE IFHKEWLIAG
MTCEIPTKGN FITLQLGDNP ILVVRGAEGQ IHAFHNVCRH RGSRLCVSDK GKVAKLVCPY
HQWTYELDGR LLFAGTEMGA DFKLSDYNLK PVHCKSAGGF IFISLAENPP AIDEFLAGLA
HYMEPYDMEN TKVAVQSVMP EKANWKLVIE NNRECYHCNG SHPELLNTLL EWDDTNDPRA
TQEFKDHVAE CAAAWDAEKI PYVHAGFGLR NRIVRMPLLK GTVSMTMDGK PGCKKLMGRI
QNPDLGSMRI LHLPHSWNHC MGDHLINFTV WPISAQETVV ITKWLVHKDA VEGVDYDVER
LRQVWDATND QDRRLGEENQ RGINSTAYQP GPYSKTYEFG VVNFLDWYSE RMLNNLGDTP
AQSLRQASGE
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