Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_4093 |
Symbol | |
ID | 5106390 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 4482698 |
End bp | 4483591 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640505357 |
Product | transporter DMT superfamily protein |
Protein accession | YP_001189572 |
Protein GI | 146309107 |
COG category | [R] General function prediction only |
COG ID | [COG2962] Predicted permeases |
TIGRFAM ID | [TIGR00688] rarD protein |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCACCG CCAACCCGCA ACGCGGGTAC ATTCTGGGCC TTACCGCCTA CATCATCTGG GGTCTGTTCC CGCTCTACTT CAAAGCTCTG CAAAGCGTCC CGGCGATGGA GATCATCGTC CACCGGGTGC TCTGGTCGGC GCTGTTCGGC GGCCTGCTGC TGCTCGTCTG GAAACACCCG GGCTGGTGGC GCGAGCTGCG CGACAACCCC AAACGCCTGG CGGTGCTGGC CGGCTGCGGC CTGCTGATCG CCACCAACTG GCTGGTGTAC GTGTGGGCGG TGAACAGCGA GCGGATGATC GAGGCCAGCC TGGGCTACTA CATCAACCCG CTGATCAACG TGCTGCTTGG CCTGCTGATC CTCGGCGAGC GCCTGCGCCG CCTGCAGTGG CTGGCGGTCG GCCTGGCCGC GCTGGGCGTG CTGCAGCAGC TTTGGCAGGT CGGCAGCCTG CCCTGGGTGT CGCTGGTACT GGCGCTGACC TTCGGCTTCT ACGGGCTGAT CCGCAAGCAG GCGCCGGTGG CAGCGCTGCC CGGGCTGGTG GTGGAAACCT GGCTGCTGCT GCCGGTGGCG CTGGCCTGGC TGGTGCTGCA CCCCGCGGCG ATGAGCAGCC AGGCGAGCTT CTGGACCAGC AGCGAGGCGC TCTGGCTGGC GGCGGCCGGC CCCATCACCC TGGTGCCGCT GGTGTGCTTC AACGCCGCGG CGCGGCATCT GCCCTACACC ACGCTGGGCT TTCTGCAGTA CCTGGCCCCG ACTCTGGTGC TACTGCAGGC CATCCTGCTG TTCGACGAAC ATTTCTCGCC GAGTACCCTG CTGGCCTTCG CCTGCATCTG GGCCGGGCTG TTTGTATACA GCCTGGATAT CTGGCTGAGC CTGCGCAAGC GCTCGAACGC TTAA
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Protein sequence | MATANPQRGY ILGLTAYIIW GLFPLYFKAL QSVPAMEIIV HRVLWSALFG GLLLLVWKHP GWWRELRDNP KRLAVLAGCG LLIATNWLVY VWAVNSERMI EASLGYYINP LINVLLGLLI LGERLRRLQW LAVGLAALGV LQQLWQVGSL PWVSLVLALT FGFYGLIRKQ APVAALPGLV VETWLLLPVA LAWLVLHPAA MSSQASFWTS SEALWLAAAG PITLVPLVCF NAAARHLPYT TLGFLQYLAP TLVLLQAILL FDEHFSPSTL LAFACIWAGL FVYSLDIWLS LRKRSNA
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