Gene Pmen_4093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4093 
Symbol 
ID5106390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4482698 
End bp4483591 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content67% 
IMG OID640505357 
Producttransporter DMT superfamily protein 
Protein accessionYP_001189572 
Protein GI146309107 
COG category[R] General function prediction only 
COG ID[COG2962] Predicted permeases 
TIGRFAM ID[TIGR00688] rarD protein 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACCG CCAACCCGCA ACGCGGGTAC ATTCTGGGCC TTACCGCCTA CATCATCTGG 
GGTCTGTTCC CGCTCTACTT CAAAGCTCTG CAAAGCGTCC CGGCGATGGA GATCATCGTC
CACCGGGTGC TCTGGTCGGC GCTGTTCGGC GGCCTGCTGC TGCTCGTCTG GAAACACCCG
GGCTGGTGGC GCGAGCTGCG CGACAACCCC AAACGCCTGG CGGTGCTGGC CGGCTGCGGC
CTGCTGATCG CCACCAACTG GCTGGTGTAC GTGTGGGCGG TGAACAGCGA GCGGATGATC
GAGGCCAGCC TGGGCTACTA CATCAACCCG CTGATCAACG TGCTGCTTGG CCTGCTGATC
CTCGGCGAGC GCCTGCGCCG CCTGCAGTGG CTGGCGGTCG GCCTGGCCGC GCTGGGCGTG
CTGCAGCAGC TTTGGCAGGT CGGCAGCCTG CCCTGGGTGT CGCTGGTACT GGCGCTGACC
TTCGGCTTCT ACGGGCTGAT CCGCAAGCAG GCGCCGGTGG CAGCGCTGCC CGGGCTGGTG
GTGGAAACCT GGCTGCTGCT GCCGGTGGCG CTGGCCTGGC TGGTGCTGCA CCCCGCGGCG
ATGAGCAGCC AGGCGAGCTT CTGGACCAGC AGCGAGGCGC TCTGGCTGGC GGCGGCCGGC
CCCATCACCC TGGTGCCGCT GGTGTGCTTC AACGCCGCGG CGCGGCATCT GCCCTACACC
ACGCTGGGCT TTCTGCAGTA CCTGGCCCCG ACTCTGGTGC TACTGCAGGC CATCCTGCTG
TTCGACGAAC ATTTCTCGCC GAGTACCCTG CTGGCCTTCG CCTGCATCTG GGCCGGGCTG
TTTGTATACA GCCTGGATAT CTGGCTGAGC CTGCGCAAGC GCTCGAACGC TTAA
 
Protein sequence
MATANPQRGY ILGLTAYIIW GLFPLYFKAL QSVPAMEIIV HRVLWSALFG GLLLLVWKHP 
GWWRELRDNP KRLAVLAGCG LLIATNWLVY VWAVNSERMI EASLGYYINP LINVLLGLLI
LGERLRRLQW LAVGLAALGV LQQLWQVGSL PWVSLVLALT FGFYGLIRKQ APVAALPGLV
VETWLLLPVA LAWLVLHPAA MSSQASFWTS SEALWLAAAG PITLVPLVCF NAAARHLPYT
TLGFLQYLAP TLVLLQAILL FDEHFSPSTL LAFACIWAGL FVYSLDIWLS LRKRSNA