| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4054 |
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| Symbol | |
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| ID | 5106351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4439123 |
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| End bp | 4440019 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640505318 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001189533 |
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| Protein GI | 146309068 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAGCC AACTGCGCGA CCTCGATCTG CAACTGCTGC GGCTGTTCGT CACCGTGGTG
GAAAGCGGTG GCTTCAGCGC GGCGCAAGGC GAACTGGGCA TCGGCCAGTC GACCATCAGC
ACGCAGATGG CCAAGCTGGA AACGCGCCTG GGTTTTCGCC TGTGCGAACG CGGCAAGGCC
GGCTTTCGCC TGACGGCCAA GGGCGAGCAG GTGCTGGCCG CCACGCGCAA GCTGTTCACC
GCCATCGAGA CCTTCAAGGG CGAGGCCCAG GGCATGGCCG ACAAGCTGCT CGGCGAGCTG
CGCATCGGCC TCTCCGAAGC GCTGCCCGAT CAGGTGCTGG AGCGCCTCGG CGCGGCCATC
GGCCGCTTTC GTCGGCGCAA CCAGGCGGTG CAGATCGAGC TGCTCAGCGC CATGCCCGCC
GAACTGGAGC GGCGCCTGCT GCAGGACCAG CTGCAACTGG CCATCGGCTA CTTCTCCGGC
AGCCAGACGG CGCTGGACTA TCACCCGCTG TTCGACGAGC GCCAGCGCCT GTACTGCGGC
CACCAGCACC CGCTGTTCGC CCGTGAGGCG CTGAGCGTCG ATGACCTGCA GGGCTGCGAC
CGCGTCGTGC ATCCTTACCG CTTCATCAGT GCCGACGAGC CCTGGCAGGG CGGCACCAGC
AGCGCGCGCT GCGAGCAGGT CGAGGGCAGC CTGGCGTTGA TCCTCTCCGG CGCTCACCTG
GGCTATCTGC CCGAGCACAT CGCCCAGCCC TGGGTCGCCC GCGGCAGCTT GCGCGCCCTG
CCCGGCGACT GGGATTTCAC CGTGCAGTTT CGCCTGGCCA GCCACCGTGG TCATACGCCC
AGCGAAGCGC AGCTGGCCTT CGCCGATGAC CTGCTGGCGG CCTTCGCCGC GGGCTAG
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| Protein sequence | MLSQLRDLDL QLLRLFVTVV ESGGFSAAQG ELGIGQSTIS TQMAKLETRL GFRLCERGKA
GFRLTAKGEQ VLAATRKLFT AIETFKGEAQ GMADKLLGEL RIGLSEALPD QVLERLGAAI
GRFRRRNQAV QIELLSAMPA ELERRLLQDQ LQLAIGYFSG SQTALDYHPL FDERQRLYCG
HQHPLFAREA LSVDDLQGCD RVVHPYRFIS ADEPWQGGTS SARCEQVEGS LALILSGAHL
GYLPEHIAQP WVARGSLRAL PGDWDFTVQF RLASHRGHTP SEAQLAFADD LLAAFAAG
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