| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4048 |
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| Symbol | |
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| ID | 5106345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4430311 |
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| End bp | 4431696 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640505312 |
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| Product | citrate transporter |
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| Protein accession | YP_001189527 |
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| Protein GI | 146309062 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG2610] H+/gluconate symporter and related permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTACCC TCGGTATTCT GATTTCCCTC GCCTTGTTGA TGTACCTCGC CTACCGCGGC
ATCAACGTCC TGATCCTCGC TCCGCTGCTG GCCCTGCTGG CCCTGCTGTT CGCCGGCGAC
GTCGGCCTGC TGCTGCCCAC CTACACCCAG GTGTTCATGA AGGCCATGGG CGGCTACGTG
ATTCAGTTCT TCCCGCTGTT CCTGCTCGGC GCCCTGTTCG GCAAGCTGAT GGACGACTCG
GGATCGGCGC GCGCCATCGC CCACGGCATC GTGGCCAAGG TCGGCAGCGA GCGCGCCATC
CTGGCCATCG TGCTGGCCTG CGGCATCCTC ACCTACGGCG GCGTGTCGCT GTTCGTGGTG
GCCTTCGCCG TGTATCCGAT CGGCGCAGCG CTGTTTCGCG AGGCGGGCAT TCCCAAACGC
CTGATCCCCG GTGCCATCGC CCTCGGCTCG TTCACCTTCA CCATGACCGC CCTGCCCGGC
ACCCCGGCGA TCCAGAACGC CATTCCCAAC CCTTTCTTCG GCACCGACGC CTTCGCCGCG
CCGGGCCTGG GGGTGATCGC CGGGCTGATC ATGTTCGGCC TCGGCACCTG GTGGCTCACC
GCGCAGTCGC GCAAGCTGAT GGCTGCCGGC GAAGGCTACG GCGAGCATCG CGATGACCCG
GTCAGCGAAG AGCGCCGCGA CATTCCCGGC TTCTGGCTGG CGCTGCTGCC GATCTTCGTG
GTGATCGCGC TGAATTTCCT GATGGCCAAG CAGATCCTGC CGGCCGTGGA CACCAGCTAC
CTGGCCAAGC CGGAATACGG CGGCCTGCAG GACGCCAAGT CGCTGATCGG TATCTGGTCG
ATCATCGTCG CCCTCAGCGC CGCCATCGTG CTGCTGATCG CTCTGCACTG GAAACGCTGG
ATGGACCTGA AGAAGAGCGT CAACGAGGGC GCCTTCGGCT CCATGCTGCC GATCCTCAAT
ACCGCTGCCG AGGTGGGTTA TGGCACGGTG ATCGCCTCCC TGGCCGGCTT CGTGGTCATC
CGCGACCTGG TGCTGGGCGT CTCCAGCAAC CCGCTGATCT CCGAAGCGGT GGCGGTGAAC
ATCCTCGCCG GTATCACCGG TTCGGCCTCC GGCGGCATGT CCATCGCGCT GAAGACCTTG
GGCGAGCAAT ACCTGACCAT GGCCAACGCC GCCGGCATCA GCCCCGAACT GCTGCACCGC
GTCGCCGCCA TGGCCTCTGG CTGCATGGAC ACCCTGCCGC ACAACGGCGC GGTGATCTCG
CTGCTGGCGA TCTGCAAGCT CACCCACCGC GAGTCGTACA AGTTCATCTT CGTCAACACC
GTGGCCTTCC CGCTGATGGC GCTGGCCGTG GTCATCACGT TGGGCACGCT GTTCGGCAGC
TTCTAA
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| Protein sequence | MGTLGILISL ALLMYLAYRG INVLILAPLL ALLALLFAGD VGLLLPTYTQ VFMKAMGGYV
IQFFPLFLLG ALFGKLMDDS GSARAIAHGI VAKVGSERAI LAIVLACGIL TYGGVSLFVV
AFAVYPIGAA LFREAGIPKR LIPGAIALGS FTFTMTALPG TPAIQNAIPN PFFGTDAFAA
PGLGVIAGLI MFGLGTWWLT AQSRKLMAAG EGYGEHRDDP VSEERRDIPG FWLALLPIFV
VIALNFLMAK QILPAVDTSY LAKPEYGGLQ DAKSLIGIWS IIVALSAAIV LLIALHWKRW
MDLKKSVNEG AFGSMLPILN TAAEVGYGTV IASLAGFVVI RDLVLGVSSN PLISEAVAVN
ILAGITGSAS GGMSIALKTL GEQYLTMANA AGISPELLHR VAAMASGCMD TLPHNGAVIS
LLAICKLTHR ESYKFIFVNT VAFPLMALAV VITLGTLFGS F
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