Gene Pmen_4037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4037 
Symbol 
ID5106334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4418316 
End bp4419599 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content66% 
IMG OID640505301 
Producthypothetical protein 
Protein accessionYP_001189516 
Protein GI146309051 
COG category[S] Function unknown 
COG ID[COG1262] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03440] conserved hypothetical protein TIGR03440 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAACC GCGCCAGCAG GATCGACGTT TCACAACTGC AACTCGAACA GCTATGGCAG 
CGCTATCAGC GGGTGCGCGC TGCCACGGAA CGGCTCTGCG AGCCGCTGGA GCGCGAGGAT
TACGTGATCC AGAGCATGCC GGACGTCAGC CCGCCGAAGT GGCATCTGGC ACATGTGACC
TGGTTCTTCG AGGCCTTCGT GCTGCAGCCC TTCCTGCGCG GATATCGCCC GCTGGATGAG
CGCTACGACC ATCTGTTCAA TTCCTACTAC AAGACCCACG GCACGCCCTT CGAGCGGGCG
CGGCGCGGGT TGTTGTCGCG GCCGACGGTA AGCGAGGTGT ACGCCTATCG CAGCCATGTC
GATCTGGCCA TGGAGCAGTT GCTCAACCGG ATGGGCAGCG AGCTCGACGA CGAGGTGCTG
CAGCGGGTCG AGCTGGGGCT GGAGCACGAG CAGCAGCATC AGGAGCTGCT GCTGATGGAT
ATCAAGCACA TCCTGGCGCA GAACCCGTTG CGCCCGGTCT ATCGCCGCGA CCTCAAGCCG
GGTGGCACTG AGGCGAGCAA GCTACGCTGG ATCAACTTTC CCGCCGGCCT GCGCCATGTC
GGCCATGCCG GCGAGGACTT CGCCTTCGAT TGCGAGCGGC CGCGGCATCG CGTGTTCGTC
GAGGCCTTCC GGCTCGCCAG CCGGCCGGTG AGCAATGGCG AGTATCTGGA GTTCATCCGC
GATGGCGGTT ATCGCAGTAC GGCGCTGTGG CTGGCGGACG GCTGGGACCA TATCCAGCGC
GCCGGCTGGC AGGCACCGCT GTACTGGCAA CGCGAGGGCG ACGACTGGCT GGAGCTGACC
CTGGGCGGTC CGCGCGAGTT GGATCTGGAT GCGCCGGTCT GTCACCTGAG CTACTTCGAG
GCCGAGGCCT TCGCCACCTG GGCGCAGGCG CGCCTGCCGC GCGAGGAAGA GTGGGAAGTG
GCCGCGCAGG ACGAACCGCT GTGGGGCAAC TTCGTCGAGA ACGATCATCT GCAGCCGGTG
GCCGCGGGCA CCGGCGATGG CCTGCAGCAG CTCTATGGCG ATGTCTGGGA ATGGACCGCC
AGCGCCTACC GGCCCTACCC CGGCTTTCGT CCGCTGGGCG GCAGCCTGGG TGAGTACAAC
GGCAAGTTCA TGTCCGGGCA GATGGTGCTG CGTGGCGGCA GCTGCGCCAC GCCTGAAGAC
CACGTTCGAC CCACCTATCG CAACTTCTTC TACCCCACGA TGCGCTGGCA GTTCTCCGGC
CTGCGCCTGG CCAAGGAGCT CTGA
 
Protein sequence
MPNRASRIDV SQLQLEQLWQ RYQRVRAATE RLCEPLERED YVIQSMPDVS PPKWHLAHVT 
WFFEAFVLQP FLRGYRPLDE RYDHLFNSYY KTHGTPFERA RRGLLSRPTV SEVYAYRSHV
DLAMEQLLNR MGSELDDEVL QRVELGLEHE QQHQELLLMD IKHILAQNPL RPVYRRDLKP
GGTEASKLRW INFPAGLRHV GHAGEDFAFD CERPRHRVFV EAFRLASRPV SNGEYLEFIR
DGGYRSTALW LADGWDHIQR AGWQAPLYWQ REGDDWLELT LGGPRELDLD APVCHLSYFE
AEAFATWAQA RLPREEEWEV AAQDEPLWGN FVENDHLQPV AAGTGDGLQQ LYGDVWEWTA
SAYRPYPGFR PLGGSLGEYN GKFMSGQMVL RGGSCATPED HVRPTYRNFF YPTMRWQFSG
LRLAKEL