Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_4010 |
Symbol | |
ID | 5110233 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 4384747 |
End bp | 4387563 |
Gene Length | 2817 bp |
Protein Length | 938 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640505273 |
Product | organic solvent tolerance protein |
Protein accession | YP_001189489 |
Protein GI | 146309024 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1452] Organic solvent tolerance protein OstA |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGTAA AACACCCCGC GTTCCGCAAG AAATTCCCGC TGCTGGTTAC CGGCAGTCTT CTGGCCTTAC AGCCCGCGTT CAGCCTACAG TCCTTTGCCG CCGAGCAATA CGATTGCCAG GCGTCGCCTA CGGGCGGCTG GGCCTGTGCG CCAAAGACAG CCACCAGCGC CCTGCCTCCG CGTCCACAGC ACAGCCGTAG CGCTGTCAGC ACCACCAGCG GCTCTGCCAC TGCAACTGCC ACCAAGCAGG AACCGGCTCC GGTGTTGGTC ACCGAGAGCA AGGGGCGCGC CCTGGCTTCG CGCAGTCCTG ATTACAGTCA TTTGGACTGG GTCCCGCGCG ATAAGTTGAC CGCCGCTCAG CTGGCCGAAG CAGGTCCCTA CTGCGCGGGC GCCTATATCG AGCCCCTGCG TCCGGGCATG GATGACACCA CCCCGCTCGA CGAGTCGCCG ATGTACGTGT CGGCCAAGGC CTCGCGCTAC GAGCAGGAAA AGCAGATCGC CACCCTGGCC GGCGACGTGG TTCTGCGCCA GTCCGGCATG CAGGTCGAGG CCGACGAGGC CAGCCTGCAC CAGGCCGAAA ACCGCGGCGA GCTGGTCGGC AACGTGCGCC TGCGCGACAA GGGCACGCTG GTGGTCGGCG ACCGCGCCGA GCTGCAACTC GACAACGGCG AAGCCCGTAT CGACAACGCC GAATACGTGA TGCACCAGGC CCATGTGCGC GGCAGCGCGC TCTATGCCAA ACGCGAAGAG ACCGCGATCA TCCGCCTCAA GGACGGCACC TACACCCGCT GCGAGCCGGG TGACAATGCC TGGCACCTGA AGGGCAACAA CGTCACCCTG AACCCGGCGA CCGGCTTCGG TACCGCGACC AACGTGACGC TGCGGGTCAA GGACATTCCG GTGTTCTACA CCCCGTACAT CTATTTCCCG ATCGACGACC GTCGCCAGTC CGGCTTCCTG CCGCCGAGCC TGGGCACGTC GAGCAGCAAC GGCTTCTCGC TGCAGACCCC CTACTACTTC AACCTGGCGC CGAACTACGA CGCCACGCTC TACCCCACCT ACATGGCCAA GCGCGGCCTG CTGATGGAAG GCGAATTCCG CTACCTGACC GAGAGCAGCG AAGGCCAGGT CGGCGGTGCA TGGCTCAACG ACCAGGAAGA CGAGCGCAAG CTGCAGTCCG AATACGAAGA CCAGCGCTGG ATGTACAGCT GGCAGCACAA ACAGGGCCTG AATTCGCGCC TGTTGGCCGA AGTCGATTAC ACAGACATCA GCGACCCCTA CTACTTCCAG GATCTCGATA CCGACCTGGG CATCGAAACC CAGAGTTACG TGAACCAGCG TGGCACGCTG ACCTACCGTG GCGACAGCTA CACCGCCCGC CTGAACGTGC ATGCGTACGA ACTGGCCAAT ATCACTGACA TCACTCCGTA TGACCGTCTG CCGCAGATTA CCCTGGATGG CAAGCTGCCG TTCAACCCGG GCGGCCTGGA CTTCACCTAT GGCACCGAGT ACGTGCGCTT CGACCGCAAT CTGCGCTCCG GCTTCTTCGT CGACAAGGAT GGCGTCACCG GCCGCCCGCA GGATCTCTGG TACGACGCCC GCCTCACCGG CCTGAACCGA GCAGACGGTG AACGTCTGCA TCTGGAGCCA GGCGTAAGCC TGCCATTGAA CTGGAGCTGG GGCTTCGTGA AACCCCAGGT CAAGTACCTG CATACTCAGT ATCAGGTGAA TCTGGACGGC CAGGGCAAGG CAGATCTCGC CACCAACGAT CCTGAAAACC AGTGGTTCGG CGTCGACTAC AAGGGCTCGC CCAATCGCGG CGTCGGCCTG TTCAGCCTCG ACAGTGGCCT GTACTTCGAC CGCAACACCC AGCTGTTCGG CCGGGAGACC CGCCAGACCC TGGAACCGCG AGCCTTCTAC CTCTACGTGC CGGAAGAGGA TCAGACCGAC ATCCCGATCT TCGACACTGG CGAGCCGACC TTCAGCTACG CCTCGCTGTG GCGTGAGAAC CGCTTCAGCG GCAAAGACCG TATCGGCGAC GAGAACAAGC TGTCGCTGGG CGTGACCAGC CGCTGGATCG AGCCCAACGG CTTCGAGCGC CAGCGCTTCA GCGTCGGTCA GGCCTTCTAC TTCGAGGACC GCAAGGTACA ACTGGCAGGT ATCGATTACC GCGGCCGCCA GGACGCGACC TCGGACGTAT CGCCTTACGC GCTGGAGTAC CTGTATCGCT TCAACCGCGA CTGGCGCTTC TCCTCGACCT TCAACTGGGA CCCGGATCAG CACGCCACCC GCTCGGGCAG CGCGATGTTC CATTACCAGC CGGAGGACAA CCCGAACAAG ATCGTCAACC TGGGCTACCG CTATCGTAAC GACATCGTGC GCTACGACCG TGACAGCGGT ACCTGGACCA CCAACCCGGA CTACGGCAAT CCGACTCTCG CTGACGGCTC GCCGAACCCC AACTACATCA AGAATTACTA CAAGATCGAC CAGCATGACT TCTCCGTCAT CTGGCCGCTG GCACCGCAGT GGAGCCTGAT CTCGCGCTGG CAGTACGACT ACGGCCGCAA CCGTACCCTG GAGGCCTTCG GTGGCTTCGA GTACGACAGC TGCTGCTGGA AGCTGCGCCT GATCAACCGC TACTGGATCG ACTACGACGA AGTCAGCCTC GACCCATCGC GCAACGACGA GCCGGACCGC GGCATCTTCC TGCAGATCGT CCTCAAGGGC CTCGGCGGCG TTGTTGGCAA CAAGGTGGAA ACTTTCCTCG ACCAAGGCAT TCAAGGTTAC CGTGAACGTG AAGACCAAGC TTTCTGA
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Protein sequence | MAVKHPAFRK KFPLLVTGSL LALQPAFSLQ SFAAEQYDCQ ASPTGGWACA PKTATSALPP RPQHSRSAVS TTSGSATATA TKQEPAPVLV TESKGRALAS RSPDYSHLDW VPRDKLTAAQ LAEAGPYCAG AYIEPLRPGM DDTTPLDESP MYVSAKASRY EQEKQIATLA GDVVLRQSGM QVEADEASLH QAENRGELVG NVRLRDKGTL VVGDRAELQL DNGEARIDNA EYVMHQAHVR GSALYAKREE TAIIRLKDGT YTRCEPGDNA WHLKGNNVTL NPATGFGTAT NVTLRVKDIP VFYTPYIYFP IDDRRQSGFL PPSLGTSSSN GFSLQTPYYF NLAPNYDATL YPTYMAKRGL LMEGEFRYLT ESSEGQVGGA WLNDQEDERK LQSEYEDQRW MYSWQHKQGL NSRLLAEVDY TDISDPYYFQ DLDTDLGIET QSYVNQRGTL TYRGDSYTAR LNVHAYELAN ITDITPYDRL PQITLDGKLP FNPGGLDFTY GTEYVRFDRN LRSGFFVDKD GVTGRPQDLW YDARLTGLNR ADGERLHLEP GVSLPLNWSW GFVKPQVKYL HTQYQVNLDG QGKADLATND PENQWFGVDY KGSPNRGVGL FSLDSGLYFD RNTQLFGRET RQTLEPRAFY LYVPEEDQTD IPIFDTGEPT FSYASLWREN RFSGKDRIGD ENKLSLGVTS RWIEPNGFER QRFSVGQAFY FEDRKVQLAG IDYRGRQDAT SDVSPYALEY LYRFNRDWRF SSTFNWDPDQ HATRSGSAMF HYQPEDNPNK IVNLGYRYRN DIVRYDRDSG TWTTNPDYGN PTLADGSPNP NYIKNYYKID QHDFSVIWPL APQWSLISRW QYDYGRNRTL EAFGGFEYDS CCWKLRLINR YWIDYDEVSL DPSRNDEPDR GIFLQIVLKG LGGVVGNKVE TFLDQGIQGY REREDQAF
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