Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_4008 |
Symbol | |
ID | 5110231 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 4382929 |
End bp | 4383600 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640505271 |
Product | nucleotidyl transferase |
Protein accession | YP_001189487 |
Protein GI | 146309022 |
COG category | [J] Translation, ribosomal structure and biogenesis [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGCGA TGATCCTCGC CGCCGGCAAG GGTGAACGCC TGCGTCCGCT GACCCTGCAT ACGCCGAAAC CGCTGGTGAA GGCGGCTGGC GTACCGTTGA TCGAGTATCA CGTCCGCGCC CTGGTCGCCG CCGGCTTCAC CGAGCTGGTG ATCAACCATG CCTGGCTGGG CCAGCAGATC GAGGGCTACC TCGGTGATGG CTCGCGCTTT GGCGCGCACA TCGTTTACTC ACCCGAGGGC GAGCCTCTGG AAACCGGCGG TGGCATCTTC AAGGCGCTAC CGCTGTTGGC TGATGAGCCA TTTCTGGTGG TCAACGGCGA CATCTTCACC GATTACCCGT TCGCCGAGCT GCGCAAGCCC ATGAGCGGCC TGGCGCATCT GGTGCTGGTG GACAACCCGG CGCATCACCC GCAAGGGGAT TTTGTTCTGG CGATGGGGCA GGTACAGGAC GCCGAGTCGC TGGGTGAGCG CCTGACTTAC AGCGGTATCG CTGTATTGCA TCCGCGTCTG TTCGCCGCCT GCCAGCCAGG CGCTTTCAAG CTGGCGCCGC TGCTGCGCTC GGCCATGCAA CAGGGGCAGG TCAGCGGTGA GCGCCATGCC GGGTGCTGGA TCGACGTTGG CACCCACGAG CGCCTGGCCG AGGTGGAACG CCTGCTGCAG GAGGCACGCT AG
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Protein sequence | MKAMILAAGK GERLRPLTLH TPKPLVKAAG VPLIEYHVRA LVAAGFTELV INHAWLGQQI EGYLGDGSRF GAHIVYSPEG EPLETGGGIF KALPLLADEP FLVVNGDIFT DYPFAELRKP MSGLAHLVLV DNPAHHPQGD FVLAMGQVQD AESLGERLTY SGIAVLHPRL FAACQPGAFK LAPLLRSAMQ QGQVSGERHA GCWIDVGTHE RLAEVERLLQ EAR
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