| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4000 |
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| Symbol | |
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| ID | 5110223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4373123 |
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| End bp | 4373950 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640505263 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001189479 |
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| Protein GI | 146309014 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.360042 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAGCC CCTACATGTC ACCCGTCGAG CGCCTCTGGT ATTACGGCCT GCGTATCATC
TGCGCCCTGG TGCTGCTGTT CCTGATCCTG CCGGTGCTGG TCATCGTGCC GCTATCGTTC
AACTCCGGCA CCTTCCTGGT CTACCCGCTG CAGGGCTTCT CGCTGCGCTG GTACGAAGAC
TTCTTCATGT CCGCCGACTG GATGCGTTCG CTGAAGAACA GCCTGATCAT CGCCCCGGCC
GCGACGCTGC TGGCCATGGT CTTCGGTACC CTGGCGGCCA TCGGCCTGAC CCGTGGCGAG
TTTCGTGGCA AGGCGCTGGT GATGAGCCTG CTGATCTCGC CGATGATCGT TCCTGTGGTG
ATCATCGGTG TCGCCAGCTA CCTGTTCTTC GCGCCGCTGG GCATGGGCAA CAGTTACATC
TCGCTGATTC TGGTGCATGC GGTACTGGGC GTGCCCTTCG TCATCATCAC CGTGTCGGCC
ACGCTGCAGG GCTTCAACCA CAATCTGGTG CGCGCCGCCG CCAGCCTCGG CGCCTCGCCG
CTGACCACCT TCCGCCGCGT GACCCTGCCG CTGATCGCGC CGGGGGTGAT CTCCGGAGCG
CTGTTCGCCT TCGCCACCTC GTTCGATGAA GTGGTGGTGA CCCTGTTCCT CGCCGGCCCC
GAGCAGGCCA CCCTGCCGCG ACAGATGTTC AGTGGCATCC GCGAGAACCT GTCGCCGACC
ATCGCCGCCG CCGCCACACT GTTGATCGGC TTCTCCATCC TGCTGCTGCT GACCTTGGAG
TGGCTGCGCG GGCGTAGCGA GAAGCTGCGC ACTTCGACGC CGGAATAA
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| Protein sequence | MLSPYMSPVE RLWYYGLRII CALVLLFLIL PVLVIVPLSF NSGTFLVYPL QGFSLRWYED
FFMSADWMRS LKNSLIIAPA ATLLAMVFGT LAAIGLTRGE FRGKALVMSL LISPMIVPVV
IIGVASYLFF APLGMGNSYI SLILVHAVLG VPFVIITVSA TLQGFNHNLV RAAASLGASP
LTTFRRVTLP LIAPGVISGA LFAFATSFDE VVVTLFLAGP EQATLPRQMF SGIRENLSPT
IAAAATLLIG FSILLLLTLE WLRGRSEKLR TSTPE
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