| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3980 |
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| Symbol | |
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| ID | 5110203 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4359858 |
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| End bp | 4360076 |
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| Gene Length | 219 bp |
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| Protein Length | 72 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640505243 |
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| Product | TraR/DksA family transcriptional regulator |
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| Protein accession | YP_001189459 |
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| Protein GI | 146308994 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0000000420347 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.150452 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTGATG CAGTCGATAT CGCCAATGAC CGGATGCTAG ACGAGCTGGA TCGCCGACTG
GCTAACCATG CGCTGGCCAG GCAATGCCCT GTTGCAGAGG AATGCGAGGA CTGCGGCGAC
CCGATCCCGT TCGAGCGCGT ACAGGCGCTG GCCAAGCTGC CGTGCCTGCG TTGCGTGGAA
TGCCAGGGGT ATCACGAGCG GAAAGGGGGC GGGCTATGA
|
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| Protein sequence | MADAVDIAND RMLDELDRRL ANHALARQCP VAEECEDCGD PIPFERVQAL AKLPCLRCVE
CQGYHERKGG GL
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