Gene Pmen_3929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3929 
SymbolanmK 
ID5106463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4316678 
End bp4317769 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content64% 
IMG OID640505192 
Productanhydro-N-acetylmuramic acid kinase 
Protein accessionYP_001189408 
Protein GI146308943 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2377] Predicted molecular chaperone distantly related to HSP70-fold metalloproteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00335468 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCCTCT ATATTGGCGT GATGTCCGGT ACCAGTCTGG ACGGACTGGA CATTGCGCTG 
ATCGATCAAG ATCAGCGCCC CCACCTTCTC GCCACGCTCT ACCGCCCCAT GCCAGAACGA
CTGCGTAGCG AGCTGCTGGC GTTATGCAGC GCTGGCGACG ACGAGCTGGC ACGCGCAGCC
ATTGCCGAAC AGCACTGGGT GGAACTGGCC GCCGCCGCCG TCAACGAGTT GCTTGAGCAA
CAGAACCTGA GCGCACAGCA GATCCGCGCC ATCGGCAGCC ACGGTCAGAC CGTGCGCCAC
GAACCGGCAC GCAGCTTCAC CATTCAGATC GGCAACCCGG CACTGCTGGC CGAGCTCACC
GGCATCTGCG TGGTCGCGGA TTTTCGTCGG CGCGATGTGG CTGCAGGCGG TCAGGGTGCT
CCTCTGGTCC CCGCCTTTCA CCAGGATCTG CTCGGCGATA ACCAACGGCA CGTAGCCGTG
CTCAATGTCG GCGGCTTCAG CAACCTCAGC CTGCTTTCAC CGGGCCAGGA GATTCTGGGA
TTCGACAGCG GCCCCGGCAA CGTTTTGCTC GATGCCTGGA TTCAGCATTG CCAGGGCCTT
GCCTATGACC GAGATGGCGC CTGGGCTGCC AGCGGCAACG TACACCCGGA GCTGCTGAAA
CGACTGCTGA GCGATCCCTT CTTCGCCACG CAGGGTCCGA AGAGCACCGG GCGCGAGCTG
TTCAATCTCG ACTGGTTGCT CAGCCACCTG CGGGCCTTGC CACAGCTGGC CAGCGAGGAT
GTTCAGGCGA CGCTGGTAGA GCTCACCGCA TGCAGCATCG TCAGCGCACT ACGCAGCGCC
CAGGCACAAA CGGATGCTTT GCTGGTATGT GGCGGCGGCG CCCACAACGT TTGCCTGATG
AAGCGCCTGA GCGAGATGCT GGCAGGAACC GAAGTGAGCA GCACCGCGGC CAAAGGCGTG
GACCCGGACT GGGTCGAAGC CATGGCCTTC GCCTGGCTGG CGCACTGCGC ACTGGAAGGC
ATTCCAGGCA ATCGCCCGAG TGTCACCGGC GCCAGAGGTC TGCGCGTTCT CGGCGCCATC
TACCCCGCCT GA
 
Protein sequence
MPLYIGVMSG TSLDGLDIAL IDQDQRPHLL ATLYRPMPER LRSELLALCS AGDDELARAA 
IAEQHWVELA AAAVNELLEQ QNLSAQQIRA IGSHGQTVRH EPARSFTIQI GNPALLAELT
GICVVADFRR RDVAAGGQGA PLVPAFHQDL LGDNQRHVAV LNVGGFSNLS LLSPGQEILG
FDSGPGNVLL DAWIQHCQGL AYDRDGAWAA SGNVHPELLK RLLSDPFFAT QGPKSTGREL
FNLDWLLSHL RALPQLASED VQATLVELTA CSIVSALRSA QAQTDALLVC GGGAHNVCLM
KRLSEMLAGT EVSSTAAKGV DPDWVEAMAF AWLAHCALEG IPGNRPSVTG ARGLRVLGAI
YPA