| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3928 |
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| Symbol | |
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| ID | 5106462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4315247 |
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| End bp | 4316674 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640505191 |
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| Product | peptidase M23B |
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| Protein accession | YP_001189407 |
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| Protein GI | 146308942 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0000103245 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAAA ATATCCCTAA AGCCCCGCCC TACCCTAAGA GCCACATCCT GGCTGCTAGC
GGTGTAGCTG CGCTGCTGAG CCTGGCTCTG CTGGTGTTTC CTTCGCGTGA AGTCGAAGCG
CAGAAAACCT TCCTCGATCT GGATCTGGGC AACGATGCCG AGCTGGTGCT GCAGGAAAAG
GACGACCTCC GAGCGGGACT GCCAGTGCCA GGCGCCGCCT CCCCTTTCGC CAAGATCGAG
CAAAGCGCGG ACACAGCCGA AAACAGCGCA GAAGACGCTG ACGAGAACAT CCTAGAAACA
GCCGACACCA CCACTCCCTC CGACCCCAAC CACCACAACA TTACGGTGAG CAACGGCGAT
ACGCTTTCTA CCGTATTCGC CAAGGTCGGC CTGAACGCCA ACGATCTGCA TGAAGCCCTC
AATAGCAATA AGGACGCCAA GCAGTTCAGC CGCTTGAAAG TTGGCCAGGT GCTTGAGTTC
GAACTGAATG AAGACGGCAA GCTGAAGCAT CTGCAAAGCA AGCTCAGCGA CCTGGAAACC
ATTCGCCTCA GCCGTACCGA CAAGGGCTTC GATTTCGAGC GCGATCAGGT CAAACCCGAG
GTGGTGACCA CCTACAGCCG CGGCGTGATC AACAGCTCGC TGTTCCTCTC GGCAAAGCGT
GCCGGCCTAT CGCACAGCCT GACCATGGAC CTGGCCAACG TCTTCGGTTA CGACATCGAC
TTCGCCATGG ATATTCGCGA AGGCGACGAA TTCGAAGTGA TCTATGAAGA GAAGGTGGTG
AACGGCAAAC GCGTCGGCAC CGGCAACATT CTCTCGGCGC GCTTCACCAA CCGCGGCAAG
ACCTACACGG CGGTGCGTTA CACCAACAAG CAAGGCACCA CCAGCTACTA CAACGCCAAT
GGCGAAAGCA TGCGCAAGGC GTTCATCCGC ACTCCCGTGG ACTTCGCCCG GATCAGCTCG
CGTTTCTCCA CCGGCCGCAA GCATCCGATC CTAAACAAGA TCCGTGCACA CAAGGGCGTC
GACTATGCTG CGCCACACGG CACACCGATC AAGGCAGCCG GCGACGGCCG CGTGACCCTG
GCCGGCCGCA ACGGCGGTTA CGGCAACACC GTGATCATCC AGCATGGCCA GCGCTACCGT
ACGCTCTACG CGCACATGCA GGGTTTCGCC AAAGGCATTC GCAACGGCGC GAACGTCAAG
CAAGGGCAGA TCATCGGGTA TATCGGTACC ACCGGCCTGT CCACCGGACC TCACCTGCAC
TATGAGTTCC AGGTCAACGG TGTACACGTC GACCCGCTCA GCCAGAAGCT GCCGATGGCC
GACCCCATTG CAGCGAGCGA GAAGCAGCGC TTCATGCAAC TGAGCAAACC GCTGATGGCA
CGCATGGACC AGGAAAAGGC CACCATGCTG GCCTCCAATC AGCAGTAA
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| Protein sequence | MTQNIPKAPP YPKSHILAAS GVAALLSLAL LVFPSREVEA QKTFLDLDLG NDAELVLQEK
DDLRAGLPVP GAASPFAKIE QSADTAENSA EDADENILET ADTTTPSDPN HHNITVSNGD
TLSTVFAKVG LNANDLHEAL NSNKDAKQFS RLKVGQVLEF ELNEDGKLKH LQSKLSDLET
IRLSRTDKGF DFERDQVKPE VVTTYSRGVI NSSLFLSAKR AGLSHSLTMD LANVFGYDID
FAMDIREGDE FEVIYEEKVV NGKRVGTGNI LSARFTNRGK TYTAVRYTNK QGTTSYYNAN
GESMRKAFIR TPVDFARISS RFSTGRKHPI LNKIRAHKGV DYAAPHGTPI KAAGDGRVTL
AGRNGGYGNT VIIQHGQRYR TLYAHMQGFA KGIRNGANVK QGQIIGYIGT TGLSTGPHLH
YEFQVNGVHV DPLSQKLPMA DPIAASEKQR FMQLSKPLMA RMDQEKATML ASNQQ
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