| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3903 |
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| Symbol | rpsC |
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| ID | 5106437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4282848 |
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| End bp | 4283534 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640505157 |
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| Product | 30S ribosomal protein S3 |
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| Protein accession | YP_001189382 |
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| Protein GI | 146308917 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0092] Ribosomal protein S3 |
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| TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0436883 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGTCAGA AAGTACATCC CGTTGGCATC CGCCTGGGAA TCGTCAAGGA TCACACCTCG
GTCTGGTACG CAGATGGTCG CAATTACGCC GACTACCTGA ACGCCGACCT GAAGGTTCGT
GCATACCTGC AAGACAAACT AAAAAGCGCG TCCGTTAGCC GTATCGACAT CGCTCGTCCG
GCTCAAACCG CACGCATCAC CATCCACACC GCTCGTCCCG GCATCGTGAT CGGCAAGAAA
GGTGAAGATG TTGAGAAGCT GCGTCAGGAC CTGACCAAGC AAATGGGTGT GCCGGTGCAC
ATCAACATCG AAGAGATCCG CAAGCCGGAG CTCGACGGTA TGCTGGTTGC GCAGAGCGTA
GCTCAGCAGC TGGAGCGTCG CGTTATGTTC CGTCGCGCCA TGAAGCGCGC TGTACAGAAC
GCCATGCGCA TTGGTGCCAA GGGCATCAAG ATCCAGGTGA GCGGTCGTCT TGGCGGCGCT
GAAATTGCCC GTACCGAGTG GTATCGCGAA GGTCGTGTGC CTCTGCACAC CCTGCGTGCC
GATATCGATT ACGCCACCTA CGAAGCGCAC ACCACTTACG GTGTGATCGG CGTCAAGGTT
TGGATCTTCA AGGGTGAGGT CATCGGTGGC CGCACTGAAG AGCTGAAGCC GCAAGCGCCC
GCTCCTCGTA AAGCTGCTAA GAAATAA
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| Protein sequence | MGQKVHPVGI RLGIVKDHTS VWYADGRNYA DYLNADLKVR AYLQDKLKSA SVSRIDIARP
AQTARITIHT ARPGIVIGKK GEDVEKLRQD LTKQMGVPVH INIEEIRKPE LDGMLVAQSV
AQQLERRVMF RRAMKRAVQN AMRIGAKGIK IQVSGRLGGA EIARTEWYRE GRVPLHTLRA
DIDYATYEAH TTYGVIGVKV WIFKGEVIGG RTEELKPQAP APRKAAKK
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