| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3899 |
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| Symbol | rplN |
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| ID | 5106433 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4281570 |
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| End bp | 4281938 |
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| Gene Length | 369 bp |
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| Protein Length | 122 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640505153 |
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| Product | 50S ribosomal protein L14 |
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| Protein accession | YP_001189378 |
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| Protein GI | 146308913 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0093] Ribosomal protein L14 |
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| TIGRFAM ID | [TIGR01067] ribosomal protein L14, bacterial/organelle |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.00304511 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTCAGA CTCAATCCAT GCTCGATGTG GCTGACAACA GCGGTGCACG TCGTGTTATG
TGCATCAAGG TGCTGGGCGG CTCGCATCGT CGCTACGCCG GCATCGGCGA CATCATCAAG
GTCACCGTCA AGGAAGCAAT TCCGCGCGGC AAAGTGAAGA AAGGTCAGGT CATGACCGCA
GTGGTCGTTC GTACCCGTCA CGGCGTTCGC CGTGCCGATG GTTCGATCAT CCGCTTCGAC
GGCAACGCTG CTGTTCTGCT GAACAACAAG CAAGAGCCGA TCGGTACCCG TATCTTCGGG
CCAGTGACCC GTGAACTGCG TTCCGAGAAG TTCATGAAGA TCGTCTCGCT CGCCCCTGAA
GTGCTTTAA
|
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| Protein sequence | MIQTQSMLDV ADNSGARRVM CIKVLGGSHR RYAGIGDIIK VTVKEAIPRG KVKKGQVMTA
VVVRTRHGVR RADGSIIRFD GNAAVLLNNK QEPIGTRIFG PVTRELRSEK FMKIVSLAPE
VL
|
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