| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3895 |
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| Symbol | rpsH |
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| ID | 5106429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4279779 |
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| End bp | 4280171 |
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| Gene Length | 393 bp |
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| Protein Length | 130 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640505149 |
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| Product | 30S ribosomal protein S8 |
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| Protein accession | YP_001189374 |
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| Protein GI | 146308909 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0096] Ribosomal protein S8 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000000590966 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTATGC AGGACCCGTT AGCGGACATG CTAACTCGTA TCCGTAATGC CCAGATGGCT
GAAAAGTCCG TCGTAAGCAT GCCGTCTTCC ACTCTGAAGG TGGCTGTAGC CAAGGTTCTG
AAGGACGAAG GTTACATTGC GGGTTATGAA GTCAATGGCG AAGCCAAGCC GCAGCTGTCC
ATCGAGCTGA AGTACTTCGA AGGCCGTCCG GTCATCGAGG AAGTCAAGCG CGTGAGCCGT
CCCGGCCTTC GTCAGTACAA ATCCGTCGAT GACCTGCCGA AGGTACGCGG CGGTCTCGGT
GTTTCCATCG TCTCCACCAA CAAAGGTGTG ATGACGGATC GCGCTGCGCG CGCTGCCGGT
GTCGGCGGCG AAGTGCTCTG CACCGTGTTC TAA
|
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| Protein sequence | MSMQDPLADM LTRIRNAQMA EKSVVSMPSS TLKVAVAKVL KDEGYIAGYE VNGEAKPQLS
IELKYFEGRP VIEEVKRVSR PGLRQYKSVD DLPKVRGGLG VSIVSTNKGV MTDRAARAAG
VGGEVLCTVF
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