| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3891 |
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| Symbol | rpmD |
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| ID | 5106425 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4278185 |
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| End bp | 4278364 |
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| Gene Length | 180 bp |
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| Protein Length | 59 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640505145 |
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| Product | 50S ribosomal protein L30 |
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| Protein accession | YP_001189370 |
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| Protein GI | 146308905 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1841] Ribosomal protein L30/L7E |
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| TIGRFAM ID | [TIGR01308] ribosomal protein L30, bacterial/organelle |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0000029695 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTAATA CCGTCAAAGT GACTCTGATC AAGAGCACCA ATGGCCGTCT GGCCAATCAC
AAAGCTTGCG TCAAGGGCCT GGGCCTGCGT CGCATCGGTC ACACCGTAGA GGTTCTGGAT
ACTCCGGAAA ACCGCGGCAT GATCAACAAG GCTTACTACC TGCTGAAGGT GGAGGGTTAA
|
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| Protein sequence | MANTVKVTLI KSTNGRLANH KACVKGLGLR RIGHTVEVLD TPENRGMINK AYYLLKVEG
|
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| |