Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_3881 |
Symbol | |
ID | 5106415 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 4269361 |
End bp | 4271511 |
Gene Length | 2151 bp |
Protein Length | 716 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640505135 |
Product | catalase/peroxidase HPI |
Protein accession | YP_001189360 |
Protein GI | 146308895 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0376] Catalase (peroxidase I) |
TIGRFAM ID | [TIGR00198] catalase/peroxidase HPI |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.653665 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAACC AAGGTAAATG TCCGTTCAAT CACGTCGCGG GGGGCGGCAC GACCAACAAG GATTGGTGGC CGAATCAGCT GCGTGTGGAC CTGCTGAACC AGCACTCCGA CCGATCCAAC CCGCTGGGCG AGAAGTTCAA CTACGCCGAA GCATTCAAGA AGCTCGACTA CAAGGCGCTG AAGGCCGATC TGGTCAGGCT GATGACCGAC AGCCAGGATT GGTGGCCCGC CGACTTCGGC CATTACGGCC CGCAGTTCAT CCGCATGGCC TGGCACTCCG CCGGCACCTA TCGCACTACC GACGGCCGCG GCGGCGGTGG CCGTGGTCAG CAGCGTTTCG CCCCGCTGAA CTCCTGGCCG GACAACGTCA ACATCGACAA GTCGCGTCGC CTGCTGTGGC CTATCAAGCA GAAGTACGGC CAGTCCATTT CCTGGGCCGA CCTGTACATC CTCGCCGGCA ACGTCGCGCT GGAGTCCATG GGATTCCGCA CCTTCGGCTT CGGTGCCGGT CGCGAGGACG TGTGGGAACC GGATCAGGAC GTCAACTGGG GGGCAGAGGT CGCCTGGCTG GGCGTCGATC CCAAGCGCGT CAACGATGAG CGTGAGCTGA CCGCGCCGTT TGGCGCCACG CACATGGGGC TGATCTACGT GAACCCCGAG GGCCCCAACG CCAGTGGCGA TTACCTGGCC GCGGCCAAGG ATATTCGCGC CACCTTCTAT CGCATGGCCA TGAACGATGA AGAGATCGTC GCGCTGATCG CCGGCGGTCA CACCTTCGGC AAGGCCCACG GCGCTGCACC CGAGTCACAC AAGGGCCCGG AGCCGGAAGG CGCGCCGATC GAAGCGCAGG GCCTGGGCTG GACCAGCAAC TTCGGCAGCG GTTTCGGCAA GGACACCGTT TCCAGCGGTC TGGAGGTGAC CTGGACGAAG ACGCCGGCAC TGTGGAGCAA CAACTTCTTC GAGAACCTGT TCAAGTTCGA ATGGGAGCTG ACCAAGTCGC CTGCCGGGGC CAAGCAGTGG GTGGCCAAGG ATGCGCCGGA GATCATCCCT GACGCGCATG TGCCGGGCAA ATTCCACAAG CCGACCATGC TCACCACCGA CCTCACCCTG CGTTTCGATC CCGAGTTCGG CAAGATTTCC AAGCGCTTCT ACGAAGATCC GCAGGCCTTC GCCGATGCCT TCGCGCGCGC CTGGTACAAG CTGACGCACC GCGACATGGG ACCGAAGGCC CGCTACCTCG GCCCGGAAGT GCCGAAAGAG GATCTGATCT GGCAAGACCC GCTGCCGGCT GCCATCCATA ACCCGAGCGC TGCCGATATC GCCGATCTGA AGGCCAGGAT CGCTGCATCC GGGCTATCGG TCGGTGACCT GGTCTCCGTG GCCTGGGCTT CGGCCTCCAC CTTCCGCGGT GGCGACAAGC GCGGCGGGGC CAACGGCGCG CGTCTGGCGC TGGCGCCGCA GAAGGACTGG GAAGCCAACC AGCGGGCGAT CAAGGTGCTG CCGAAGCTGG TGGAAATCCA GCAGGCTTCC GGCAAGGCGT CGCTGGCCGA TGTGATCGTG CTGGCCGGTA ACGTCGGTGT GGAGCAGGCG GCCAAGGCTG CCGGCGTGGC GGTGGACGTG CCCTTCGCTG CGGGCCGCGT CGATGCGCGT CAGGATCAGA CCGACGTGGA GTCCTTCGAT GTGCTGGAGT CGGCCGCCGA TGGCTTCCGC AACTACAGCA AGGGCAACCT GGGCGTACCC ACCGAGACCA TGCTGGTCGA CAAGGCGCAG CTGCTGACGC TGACCGCGCC GGAGCTGACC GCACTGGTCG GTGGCCTGCG CGTGCTGGGC GCCAACTACG ATGGCAGCCA GCATGGCGTG TTCACCGACA AGGTGGGCGT GCTGTCGAAC GACTTCTTCG TCAACCTGCT CGATATGAAC ACCGTCTGGA AAGCGGTGGA TGACAGCAAC GAAGTGTTCG AGGGCAGGGG GCGCAAGGAC GGTCAGGTGA AGTACACCGC CACCCGTAAC GACCTGGTGT TCGGCTCCAA CTCCATCCTG CGGGCCTATG CCGAGGTGTA CGCCAGCAGC GACGGCAAGG AGAAACTGGT CAAGGATTTC GTCGCCGCCT GGACCAAGGT GATGAACCTG GATCGCTTCG ATCTGGCCTG A
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Protein sequence | MSNQGKCPFN HVAGGGTTNK DWWPNQLRVD LLNQHSDRSN PLGEKFNYAE AFKKLDYKAL KADLVRLMTD SQDWWPADFG HYGPQFIRMA WHSAGTYRTT DGRGGGGRGQ QRFAPLNSWP DNVNIDKSRR LLWPIKQKYG QSISWADLYI LAGNVALESM GFRTFGFGAG REDVWEPDQD VNWGAEVAWL GVDPKRVNDE RELTAPFGAT HMGLIYVNPE GPNASGDYLA AAKDIRATFY RMAMNDEEIV ALIAGGHTFG KAHGAAPESH KGPEPEGAPI EAQGLGWTSN FGSGFGKDTV SSGLEVTWTK TPALWSNNFF ENLFKFEWEL TKSPAGAKQW VAKDAPEIIP DAHVPGKFHK PTMLTTDLTL RFDPEFGKIS KRFYEDPQAF ADAFARAWYK LTHRDMGPKA RYLGPEVPKE DLIWQDPLPA AIHNPSAADI ADLKARIAAS GLSVGDLVSV AWASASTFRG GDKRGGANGA RLALAPQKDW EANQRAIKVL PKLVEIQQAS GKASLADVIV LAGNVGVEQA AKAAGVAVDV PFAAGRVDAR QDQTDVESFD VLESAADGFR NYSKGNLGVP TETMLVDKAQ LLTLTAPELT ALVGGLRVLG ANYDGSQHGV FTDKVGVLSN DFFVNLLDMN TVWKAVDDSN EVFEGRGRKD GQVKYTATRN DLVFGSNSIL RAYAEVYASS DGKEKLVKDF VAAWTKVMNL DRFDLA
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