| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3817 |
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| Symbol | |
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| ID | 5106048 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4204477 |
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| End bp | 4206096 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640505072 |
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| Product | acyl-CoA synthetase |
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| Protein accession | YP_001189297 |
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| Protein GI | 146308832 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.710335 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGATCT ACGAGCAGGG CCTCGGCCGC GCCGCCGTCA ACCATGTCGC CCTCAGCCCC
CTGAGCTTCA TCGAACGTAC CGCGGCGGTT TACCCGCACT ATCCGGCCGT GGTGCATGGC
TCGATTCGCC GCAACTGGGC CGAGACCTAT GCGCGCTGCC GGCGCCTGGC CTCGGCGCTG
GCCGGCCGCG GCATCGGCCA GGGCGACACG GTGGCGGTGA TGCTGCCGAA CATTCCGGCC
ATGCTCGAAG CGCATTTCGG CGTGCCGATG ATCGGCGCGG TGCTCAACAC CCTCAACGTG
CGCCTGGATG CCGAGGCCAT CGCCTTCATG CTGCAGCATG GCGAGGCCAA GGTGGTGATC
GCCGACCGCG AGTTCTTCGA TGTGATCCAC GCCGCCATCG GCATGCTCGA CCACCCGCCG
CTGGTGATCG ACGTCGACGA CCCCGAGTAC GGCGAGGGCC AGGCGGTCAG CGAGCTGGAC
TACGAGGCCT TCCTCGCCGA GGGCGACCCC GAATTCGCCT GGCAGTGGCC CACCGACGAG
TGGCAGGCCA TCAGCCTCAA CTACACCTCC GGCACCACCG GCAACCCCAA GGGCGTGGTC
TATCACCACC GCGGTGCCTT CCTTAATGCC ATGGGCAACC AGATGACCTG GAACATGGGC
AACCACCCGG TCTACCTGTG GACCCTGCCG ATGTTCCACT GCAACGGCTG GTGCTACCCC
TGGACGATCA CCGCCCTGGC GGGGGTGCAT GTGTTCCTGC GCCGCGTCGA CCCGGCGAAG
ATCCTCACCC TGATCCGCGA CGAACAGGTC ACCCACCTGT GCGGCGCGCC CATCGTGCTC
AATGCGCTGG TGAACATGCC GGCCGAGGCC AAGGCGGCCA TCGATCACCC GGTCAAGGCC
ATGGTCGCCG GCGCCGCGCC ACCCGCGAAG GTGATCGGCG CGGTGGAGGA GATGGGCATC
CACGTCACCC ATGTGTACGG CCTGACCGAG GTCTACGGCC CGGTGACCTT GTGCGCGTGG
CACGCCGAAT GGGACGAACT GCCGCTGGAA CAACGCGCCA CCATCAAGGC GCGCCAGGGC
GTGCGCTACC CGACTCTGGA AGGGGTGATG GTGGCCGACC CGAAAACCCT GGAGCCGGTG
CCGCGTGACG GTCAGACCAT CGGCGAGATC TTCATGCGCG GCAACACCGT GATGAAGGGC
TACCTAAAGA ACCCCAGCGC CACCGCCGAA GCCTTCGAGG GCGGCTGGTT CCACACCGGC
GACCTGGGCG TGTGCCACGC CGACGGCTAT GTGGAAATCC GCGACCGCCT CAAGGACATC
ATCATCTCCG GCGGCGAGAA CATCTCCACC ATCGAGGTCG AGGGCGTGCT CTATCGCCAC
CCGGCGGTGC TGGAGGCGGC GGTGGTCGCC CGCCCGGACG AGAAATGGGG CGAGACGCCC
TGCGCCTTCA TCACCCTGAA GACCGGCCAG CAGGCCAGTG AAACCGAGAT CATGACCTTT
TGCCGCGAGC ACCTGGCCGG CTTCAAGGTG CCCAAGACCG TGGTCTTCAC CCAGCTGCCC
AAGACCAGCA CCGGCAAGAT CCAGAAGTTC GTCCTGCGCG ATATGGCCAA GGCGCTCTGA
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| Protein sequence | MSIYEQGLGR AAVNHVALSP LSFIERTAAV YPHYPAVVHG SIRRNWAETY ARCRRLASAL
AGRGIGQGDT VAVMLPNIPA MLEAHFGVPM IGAVLNTLNV RLDAEAIAFM LQHGEAKVVI
ADREFFDVIH AAIGMLDHPP LVIDVDDPEY GEGQAVSELD YEAFLAEGDP EFAWQWPTDE
WQAISLNYTS GTTGNPKGVV YHHRGAFLNA MGNQMTWNMG NHPVYLWTLP MFHCNGWCYP
WTITALAGVH VFLRRVDPAK ILTLIRDEQV THLCGAPIVL NALVNMPAEA KAAIDHPVKA
MVAGAAPPAK VIGAVEEMGI HVTHVYGLTE VYGPVTLCAW HAEWDELPLE QRATIKARQG
VRYPTLEGVM VADPKTLEPV PRDGQTIGEI FMRGNTVMKG YLKNPSATAE AFEGGWFHTG
DLGVCHADGY VEIRDRLKDI IISGGENIST IEVEGVLYRH PAVLEAAVVA RPDEKWGETP
CAFITLKTGQ QASETEIMTF CREHLAGFKV PKTVVFTQLP KTSTGKIQKF VLRDMAKAL
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