Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_3811 |
Symbol | |
ID | 5106042 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 4198244 |
End bp | 4199977 |
Gene Length | 1734 bp |
Protein Length | 577 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640505066 |
Product | MORN repeat-containing protein |
Protein accession | YP_001189291 |
Protein GI | 146308826 |
COG category | [S] Function unknown |
COG ID | [COG4642] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.481071 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCGTCA TGAACCCCCT TGCCCTGCGC CTGCTCCCCC TTTGCCTGTC CCTGCTGCTC GCCGGTTGCG ACGAGGCGCG CCCGCTGCTG CCGGCCAACG CCATTCTGCC CGACGGCGCC GAGTATCGCG GCGAGATCGT TGACGGTCTG CTGCAAGGCC CCGGACGCCT GGACTACCGC AACGGCAGCT GGTTCGTCGG CCAGTTCAAG GACGGCATGC TCGAGGGGCC CGGCGAATGG CAGGGCCCCG GCGGCGAGCA TTACCTGGGC GACTTCCACC AGGGCATGTT CCATGGCCAT GGCACCCTGA CCTACGCCGA TGGCAGCCGC TATCAGGGCG GTTTCGAGCG CAACCGTTTC AATGGCGAGG GCCTGCTGGA GCAGGGTGGC CAGCGTTATC AGGGCGAGTT TCTCAACGAC CGCTTCCATG GCCTGGGCAA ACTGGAAATG GCTGACGGCA GCAGCTTCCA GGGCCAGTTC GTCAATGGCC AGCCCGAGGG CCAGGGCGTG CGCAGCGATG CCTACGGCAA TCAGTTCAGC GGTGTGTTCG CCCAGGGCCT GCTCAGCGGC CAGGGCAGCT ATCGCAACGC CGATGGCGAC AACTACAGCG GCGGTTTCCA GAACGATGAG TTTCACGGCA AGGGCCGTTA CCAGAGCGCC AGCGGTGAAG TCTGGGCCGG CGAGTTCGTC GAGGGCGTGA TGCAGGGCCC CGGTGAATAC AACGATGGCG ACGGCACCCG CTACCTCGGC GAGTTCGCCG ACTGGCAGTA CGAAGGCGAA GGCCTACTCA CCCTGCCCGA TGGCAGCGCT TACCGGGGGC GTTTCTCCGG CGGCGAATAC AGTGGTCAGG GCACCCTGAC CCTGGCCGAC GGCAGCCGCC AATCCGGCAC CTGGCAAGAC GGCAGACTGG TGCGTGACGA TCAGGGCCAG GTGCTGCCCG ACAGCCTCGA ACTGGGCCTG CTGCAACAGG GCCAGCTGCT CGACGAAGCC ATCGCCGCGA TTCCGGCCTC GACAGAGGCG CGCGAACTCT ATGCCCTGAC CCTGGCCGGC GATGGCAAGC AAAGCGTGTT CATGCGCGAG GCCGACTACG TCAGCCGCCT GATGCGCGAG CGCTTCGGTG CCCATGGCAG CATCAGCCTG ATCAACCATC GCGACCATCT CGCCGACCGC CCGCTGGCCA CCCGCGAGAA TCTCACCCGT GTGGTCCAGG CCCTGGCCGA ACGCAGCGGC GAGGAAGACC TGATATTCAT CTATCTGACC AGCCATGGCT CGCGCCGCCA CGAACTCAAT CTCGACCAGC CGCGCCTGCA GCTGGCCGAC CTGCCGGCCA GCGAACTGGC CGCCCTGCTC GCCCCGCTCA AGCAGCGCAA CAAGGTGGTG GTGATATCGG CCTGCTACTC CGGCGGGTTC ATCCCGCCGC TGAAAGACGA CAAGACCCTG GTGATGACCG CCGCACGCGC CGACCGGGTG TCCTTCGGCT GCAGCGAAGA GAACGACTTC ACCTATTTCG GCCGCGCCCT GTTCGCCGAG GCGCTGGGCG AAACCGACAA CCTGGAACGG GCCTTCGAAC TGGCCAGGGA ACGCGTCGCC GAGCGCGAGC AGAGCGACGG TTTCGAACCT TCCGAACCGC AGATCTGGGC GCCACGCGGC GTACTCCAGC ATTGGCGCAG CCTGCGCCAG AATCAGGCTG AGCGAGCCCT GGGGGCCGTG GCCAGCAGTA GCGGCAACGA CTAA
|
Protein sequence | MSVMNPLALR LLPLCLSLLL AGCDEARPLL PANAILPDGA EYRGEIVDGL LQGPGRLDYR NGSWFVGQFK DGMLEGPGEW QGPGGEHYLG DFHQGMFHGH GTLTYADGSR YQGGFERNRF NGEGLLEQGG QRYQGEFLND RFHGLGKLEM ADGSSFQGQF VNGQPEGQGV RSDAYGNQFS GVFAQGLLSG QGSYRNADGD NYSGGFQNDE FHGKGRYQSA SGEVWAGEFV EGVMQGPGEY NDGDGTRYLG EFADWQYEGE GLLTLPDGSA YRGRFSGGEY SGQGTLTLAD GSRQSGTWQD GRLVRDDQGQ VLPDSLELGL LQQGQLLDEA IAAIPASTEA RELYALTLAG DGKQSVFMRE ADYVSRLMRE RFGAHGSISL INHRDHLADR PLATRENLTR VVQALAERSG EEDLIFIYLT SHGSRRHELN LDQPRLQLAD LPASELAALL APLKQRNKVV VISACYSGGF IPPLKDDKTL VMTAARADRV SFGCSEENDF TYFGRALFAE ALGETDNLER AFELARERVA EREQSDGFEP SEPQIWAPRG VLQHWRSLRQ NQAERALGAV ASSSGND
|
| |