Gene Pmen_3811 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3811 
Symbol 
ID5106042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4198244 
End bp4199977 
Gene Length1734 bp 
Protein Length577 aa 
Translation table11 
GC content67% 
IMG OID640505066 
ProductMORN repeat-containing protein 
Protein accessionYP_001189291 
Protein GI146308826 
COG category[S] Function unknown 
COG ID[COG4642] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.481071 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGTCA TGAACCCCCT TGCCCTGCGC CTGCTCCCCC TTTGCCTGTC CCTGCTGCTC 
GCCGGTTGCG ACGAGGCGCG CCCGCTGCTG CCGGCCAACG CCATTCTGCC CGACGGCGCC
GAGTATCGCG GCGAGATCGT TGACGGTCTG CTGCAAGGCC CCGGACGCCT GGACTACCGC
AACGGCAGCT GGTTCGTCGG CCAGTTCAAG GACGGCATGC TCGAGGGGCC CGGCGAATGG
CAGGGCCCCG GCGGCGAGCA TTACCTGGGC GACTTCCACC AGGGCATGTT CCATGGCCAT
GGCACCCTGA CCTACGCCGA TGGCAGCCGC TATCAGGGCG GTTTCGAGCG CAACCGTTTC
AATGGCGAGG GCCTGCTGGA GCAGGGTGGC CAGCGTTATC AGGGCGAGTT TCTCAACGAC
CGCTTCCATG GCCTGGGCAA ACTGGAAATG GCTGACGGCA GCAGCTTCCA GGGCCAGTTC
GTCAATGGCC AGCCCGAGGG CCAGGGCGTG CGCAGCGATG CCTACGGCAA TCAGTTCAGC
GGTGTGTTCG CCCAGGGCCT GCTCAGCGGC CAGGGCAGCT ATCGCAACGC CGATGGCGAC
AACTACAGCG GCGGTTTCCA GAACGATGAG TTTCACGGCA AGGGCCGTTA CCAGAGCGCC
AGCGGTGAAG TCTGGGCCGG CGAGTTCGTC GAGGGCGTGA TGCAGGGCCC CGGTGAATAC
AACGATGGCG ACGGCACCCG CTACCTCGGC GAGTTCGCCG ACTGGCAGTA CGAAGGCGAA
GGCCTACTCA CCCTGCCCGA TGGCAGCGCT TACCGGGGGC GTTTCTCCGG CGGCGAATAC
AGTGGTCAGG GCACCCTGAC CCTGGCCGAC GGCAGCCGCC AATCCGGCAC CTGGCAAGAC
GGCAGACTGG TGCGTGACGA TCAGGGCCAG GTGCTGCCCG ACAGCCTCGA ACTGGGCCTG
CTGCAACAGG GCCAGCTGCT CGACGAAGCC ATCGCCGCGA TTCCGGCCTC GACAGAGGCG
CGCGAACTCT ATGCCCTGAC CCTGGCCGGC GATGGCAAGC AAAGCGTGTT CATGCGCGAG
GCCGACTACG TCAGCCGCCT GATGCGCGAG CGCTTCGGTG CCCATGGCAG CATCAGCCTG
ATCAACCATC GCGACCATCT CGCCGACCGC CCGCTGGCCA CCCGCGAGAA TCTCACCCGT
GTGGTCCAGG CCCTGGCCGA ACGCAGCGGC GAGGAAGACC TGATATTCAT CTATCTGACC
AGCCATGGCT CGCGCCGCCA CGAACTCAAT CTCGACCAGC CGCGCCTGCA GCTGGCCGAC
CTGCCGGCCA GCGAACTGGC CGCCCTGCTC GCCCCGCTCA AGCAGCGCAA CAAGGTGGTG
GTGATATCGG CCTGCTACTC CGGCGGGTTC ATCCCGCCGC TGAAAGACGA CAAGACCCTG
GTGATGACCG CCGCACGCGC CGACCGGGTG TCCTTCGGCT GCAGCGAAGA GAACGACTTC
ACCTATTTCG GCCGCGCCCT GTTCGCCGAG GCGCTGGGCG AAACCGACAA CCTGGAACGG
GCCTTCGAAC TGGCCAGGGA ACGCGTCGCC GAGCGCGAGC AGAGCGACGG TTTCGAACCT
TCCGAACCGC AGATCTGGGC GCCACGCGGC GTACTCCAGC ATTGGCGCAG CCTGCGCCAG
AATCAGGCTG AGCGAGCCCT GGGGGCCGTG GCCAGCAGTA GCGGCAACGA CTAA
 
Protein sequence
MSVMNPLALR LLPLCLSLLL AGCDEARPLL PANAILPDGA EYRGEIVDGL LQGPGRLDYR 
NGSWFVGQFK DGMLEGPGEW QGPGGEHYLG DFHQGMFHGH GTLTYADGSR YQGGFERNRF
NGEGLLEQGG QRYQGEFLND RFHGLGKLEM ADGSSFQGQF VNGQPEGQGV RSDAYGNQFS
GVFAQGLLSG QGSYRNADGD NYSGGFQNDE FHGKGRYQSA SGEVWAGEFV EGVMQGPGEY
NDGDGTRYLG EFADWQYEGE GLLTLPDGSA YRGRFSGGEY SGQGTLTLAD GSRQSGTWQD
GRLVRDDQGQ VLPDSLELGL LQQGQLLDEA IAAIPASTEA RELYALTLAG DGKQSVFMRE
ADYVSRLMRE RFGAHGSISL INHRDHLADR PLATRENLTR VVQALAERSG EEDLIFIYLT
SHGSRRHELN LDQPRLQLAD LPASELAALL APLKQRNKVV VISACYSGGF IPPLKDDKTL
VMTAARADRV SFGCSEENDF TYFGRALFAE ALGETDNLER AFELARERVA EREQSDGFEP
SEPQIWAPRG VLQHWRSLRQ NQAERALGAV ASSSGND