| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3796 |
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| Symbol | |
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| ID | 5106027 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4184222 |
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| End bp | 4185232 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640505051 |
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| Product | lytic murein transglycosylase B |
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| Protein accession | YP_001189276 |
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| Protein GI | 146308811 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02282] lytic murein transglycosylase B |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.38332 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATTCAC TGCGCAGTTG GGCTGCTCGG ACGTTCATCG GGGTCGGCAT GGCCGGCCTG
CTCGGCACAG GTGCCCAGGC GCTGGCGGCT GATTACGACG GCTCGCCGCA GGTGGCCGAG
TTCGTCGAGG AAATGACCCG CGACTACGGC TTCGCCAGCG AGCAGCTGGT TGCCCTGTTC
GCCGAGGTGG AGCGCAAGCA GGCCATTCTC GACGCCATTT CGCGTCCGGC GGAGAAGGTC
AAGCCATGGA AGGAGTACCG CCCGATCTTC ATCACCGACG CCCGCATCGC GCGTGGTGTG
GACTTCTGGC GTCAGCACCA GGCGGCGCTG GAGAAGGCCG AAGCCGAGTA CGGCGTGCCG
CCGCAATTCA TTGTCGCGAT CATCGGCGTG GAGACCTTCT ACGGCGGCAA CACCGGCAGC
TGGCGGGTGA TGGACGCGCT GTCCACCCTG GCCTTCGACT ACCCGCCGCG CGCGCCGTTC
TTCCGCAAGG AATTGCGCGA GTTCCTCATG CTGACTCGCG AGGAGCAGGT CGATCCGCTT
TCGCTGAAGG GCTCCTACGC CGGTGCCATG GGCCTGCCGC AGTTCATGCC GAGCAGCTTC
CGCGCTTACG CCGTGGACTT CGACGGTGAC GGCCACATCA ACATCTGGAG CAATCCGACC
GATGCCATCG GCAGTGTTGC CAGCTATTTC AAGCGTCACG GCTGGCAGGC CGGCGGCCAG
GTCGCCAGTC GCGTCCAGGT CAGCGGTGCG CGGGTCGACG AAGGCCTGAC CCAGGGCCTG
GACCCGGTGA AGAACGTCGC CGAGCTGCGT GCGCTGGGCT GGAAGAGCAA GGACAAGCTG
GCCGAAGATC TGCCGGTCAC CGCCTTCCGC CTGGAGGGCG CGCAGGGCGA CGAATACTGG
TTCGGCCTGC CCAACTTCTA CACCATCACC CGCTACAATC GCAGCGTGAT GTACGCCATG
GCGGTCAACC AACTGGCTGA ACTGCTGGTC GAAGCACGGG GTAATCGATG A
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| Protein sequence | MHSLRSWAAR TFIGVGMAGL LGTGAQALAA DYDGSPQVAE FVEEMTRDYG FASEQLVALF
AEVERKQAIL DAISRPAEKV KPWKEYRPIF ITDARIARGV DFWRQHQAAL EKAEAEYGVP
PQFIVAIIGV ETFYGGNTGS WRVMDALSTL AFDYPPRAPF FRKELREFLM LTREEQVDPL
SLKGSYAGAM GLPQFMPSSF RAYAVDFDGD GHINIWSNPT DAIGSVASYF KRHGWQAGGQ
VASRVQVSGA RVDEGLTQGL DPVKNVAELR ALGWKSKDKL AEDLPVTAFR LEGAQGDEYW
FGLPNFYTIT RYNRSVMYAM AVNQLAELLV EARGNR
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