| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3794 |
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| Symbol | |
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| ID | 5106025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4181938 |
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| End bp | 4183098 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640505049 |
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| Product | Serine-type D-Ala-D-Ala carboxypeptidase |
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| Protein accession | YP_001189274 |
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| Protein GI | 146308809 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATCA CCAGCTTCGC GCAACGTGCC TTCCTCTTCC TGGGCCTGCT GACCGCACCG
CTCGCCTGGT CCAGCCAGCA AGTGGTTCCC GCTCCCCCGC AACTGGCCGC GACTTCCTAC
GTGCTGATGG ATGCCGCCAG TGGCCAGGTG CTGGTGGAGA GCAACGGTGA CCAGCGCCTG
CCGCCGGCCA GCCTGACCAA GCTGATGACC GCCTATATCG CCACCCTGGA GATCAACCGC
GGCCAGATCA AGGAAAGCGA CATGGTCCGC GTCAGCGAGA AGGCCTGGCG CAAGGGCGGC
TCGAAGATGT TCATCGAGGT GGGCAAGGAA GTCTCGGTGG ACGATCTGCT GCACGGCATC
ATCATCCAGT CGGGCAACGA CGCCAGCATC GCCATCGCCG AGCACATCGC CGGTAGCGAG
GACGCCTTCG CCGACATGAT GAACACCCAT GCCCAGCGTC TCGGCATGAG CAATACCCAC
TTCATGAACT CCACCGGCTG GCCGGACCCG GAGCATTACT CCTCGGCGCA CGACATGGCC
AAGCTGGCCC GCGCGATCAT CTACGAGGAC CCGGCTCACT ACGATATCTA CAAGCAGAAG
GAATTCCTCT GGAACGGCAT CAAGCAGCCG AACCGCAACC TGCTGCTGTG GCGTGACAGT
ACGGTCGATG GCCTCAAGAC CGGCCACACC GAAGAAGCCG GTTACTGCCT GGTGGCCTCT
GCCGTGCGTG ACGGCCAGCG CCTGATCGCC GCCGTGTTCG GCACCGTCAG CGAGCAGGCC
CGCGCCGCCG AGGTACAGAA GCTCCTGACC TACGGCTTCC GCTTCTTCGA AAGCCGCACC
TTCTACAAGA AGGGCACCGA GCTGGCGCAG GCTACCGTCT GGAAGGGCAC CACGCATCAG
GTCAAGGCCG GCCTGGCCGA GGACCTGACC ATGACCCTGC CCAAGGGCCA GCTGGAGAAG
CTGCAGGCGA GCATGAGCCT CAATCCGCGT CTGATCGCGC CGATCCAGCA GGGCGACGTG
ATCGGCAAGG TCGAGGTCAA GCTGGGCGAG GAGGTGGTGC GCAGCACAGA CCTGGTGGCC
CTCGAGGCGG TCGAAGAGGG CGGTCTGCTG CGCCGTCTGT GGGACAGCAT CCGACTGTTC
TTCTTCGGCC TGTTCAACTG A
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| Protein sequence | MNITSFAQRA FLFLGLLTAP LAWSSQQVVP APPQLAATSY VLMDAASGQV LVESNGDQRL
PPASLTKLMT AYIATLEINR GQIKESDMVR VSEKAWRKGG SKMFIEVGKE VSVDDLLHGI
IIQSGNDASI AIAEHIAGSE DAFADMMNTH AQRLGMSNTH FMNSTGWPDP EHYSSAHDMA
KLARAIIYED PAHYDIYKQK EFLWNGIKQP NRNLLLWRDS TVDGLKTGHT EEAGYCLVAS
AVRDGQRLIA AVFGTVSEQA RAAEVQKLLT YGFRFFESRT FYKKGTELAQ ATVWKGTTHQ
VKAGLAEDLT MTLPKGQLEK LQASMSLNPR LIAPIQQGDV IGKVEVKLGE EVVRSTDLVA
LEAVEEGGLL RRLWDSIRLF FFGLFN
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